Gene ECH74115_3476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3476 
Symbol 
ID6970482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp3218911 
End bp3219360 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content47% 
IMG OID643387282 
Productfimbrial subunit 
Protein accessionYP_002271745 
Protein GI209397626 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.560689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTGGA GCTTTAGCTT TATGGCGCTC TCGAATGTCT CTTTTCATGG TTATTTAGTG 
CAGCCACCCA ATTGCTCTAT TAGTAATGGG CAAAATATAG AGTTGACGTT TCGGGACGTG
AATATTGATG ACATTAACGG TAGCAATTAC GAACAGGTCG TGCCGTATAC CATTACCTGC
GATACCGCTG TCCGTGACCC TCAAATGGAA ATGACGTTGA CCTGGAGTGG TACGCAGAGT
GACTTTGACG ATTCGGCCGT AGCCACGGAT CTCAATGGAT TAGGAATACA CCTCAAACAA
GCCGGGAGCG ATTTTAAGCT GCATACGCCC TTAGTGGTGA ATGAAACATC CCTTCCGGTA
CTAACGGCAG TACCCGTAAA AAAGAGCGGT GTCGACTTAC CCGAGTCAGA CTTTGAAGCA
TGGGCTACGT TACAGGTGGA TTACCAATGA
 
Protein sequence
MLWSFSFMAL SNVSFHGYLV QPPNCSISNG QNIELTFRDV NIDDINGSNY EQVVPYTITC 
DTAVRDPQME MTLTWSGTQS DFDDSAVATD LNGLGIHLKQ AGSDFKLHTP LVVNETSLPV
LTAVPVKKSG VDLPESDFEA WATLQVDYQ