Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1246 |
Symbol | |
ID | 6969119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1254110 |
End bp | 1254910 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643385239 |
Product | putative rutD protein |
Protein accession | YP_002269734 |
Protein GI | 209397669 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR03611] pyrimidine utilization protein D |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTT CACTCTCACC TCCCCCTTAT GCTGATGCGC CCGTAGTGGT GTTGATTTCG GGTCTTGGCG GTAGCGGCAG TTACTGGTTA CCGCAACTGG CGGTGCTGGA GCAGGAGTAT CAGGTAGTCT GTTACGACCA GCGCGGCACC GGCAATAATC CCGACACGCT GGCAGAAGAT TACAGTATCA CCCAGATGGC AGCGGAACTG CATCAGGCGC TGGTAGCCGC AGGGATTGAG CATTACGCAG TGGTCGGCCA TGCGCTCGGT GCGCTGGTGG GAATGCAGCT GGCGCTGGAT CATCCCGCGT CGGTAACTGT GCTGGTCTGC GTTAACGGCT GGCTACGAAT AAACGCCCAT ACGCGCCGCT GTTTTCAGGT TCGCGAACGA TTACTGTATA GCGGTGGCGC GCAGGCATGG GTGGAAGCGC AGCCGTTGTT CCTCTATCCC GCCGACTGGA TGGCGGCCCG CGCACCTCGC CTTGAGGCAG AAGACGCGCT GGCACTGGCG CATTTTCAGG GCAAAAATAA TTTACTGCGT CGACTTAACG CCCTCAAACG CGCTGACTTT AGTCACCATG CGGATCGCAT CCGCTGCCCG GTGCAAATCA TCTGCGCCAG TGATGATCTG CTGGTGCCAT CAGCATGTTC CAGTGAACTT CATGCCGCCC TGCCCGATAG CCAGAAAATG GTGATGCGCT ATGGCGGACA CGCCTGCAAC GTGACCGATC CCGAAACGTT TAATGCTCTG TTACTCAACG GGCTTGCCAG CCTGTTACAT CACCGTGAAG CCGCCCTGTA A
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Protein sequence | MKLSLSPPPY ADAPVVVLIS GLGGSGSYWL PQLAVLEQEY QVVCYDQRGT GNNPDTLAED YSITQMAAEL HQALVAAGIE HYAVVGHALG ALVGMQLALD HPASVTVLVC VNGWLRINAH TRRCFQVRER LLYSGGAQAW VEAQPLFLYP ADWMAARAPR LEAEDALALA HFQGKNNLLR RLNALKRADF SHHADRIRCP VQIICASDDL LVPSACSSEL HAALPDSQKM VMRYGGHACN VTDPETFNAL LLNGLASLLH HREAAL
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