Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_1164 |
Symbol | |
ID | 6969511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1182144 |
End bp | 1182731 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643385163 |
Product | putative envelope protein encoded within prophage CP-933N |
Protein accession | YP_002269662 |
Protein GI | 209399020 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.378647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATTATG GCAAAGTTAA AATTTTCGAT ATAAACCATT CCATAGTAAG TCAATATCTG GAAATTCAGC ATAAGCTGAC AAGAACTCAT CTGACTGACG TTCCGCTTTA TCTGTCACTG GAACCCAACA ACCCTGCGTT GGCTGAGGCT TTAATTACCA GCCAGAGATT TTCCGGAGAT ACCACGGATA TGTTTCTTAT GATGGCATGC CTGTCGCTGT TTGAATCAGA TGAACGGATA TTATTATTTT TAAGTGGATG TTTATCCAGT ATAAGTGCCA AAGTCAGGGC GATAATTCAG ACAGATATAT CAGCAAGCTG GACGCTTGGT GCGATTGCGT TACGCCTGCA TATGAGTGAG AGTTTGTTAA AGATAAAACT GAAAAATGAA GGGCACATGT TCAGTCGCTT GTTGCTGGAA GAGCGGATGC GTGTTGCTGT CAATATGTTA TGTTCCCGGC ATGGATATGG ACAGGCTGTA GCAGAAAAAT GCGGTTATTC AAGCTGGTCC TACTTTATTT CTGTATTTCA CCGCTATTAT GGCTTCCCGC CAGACAGATA TGTATCCAGG CAAGGGCTTG ATTATTGA
|
Protein sequence | MHYGKVKIFD INHSIVSQYL EIQHKLTRTH LTDVPLYLSL EPNNPALAEA LITSQRFSGD TTDMFLMMAC LSLFESDERI LLFLSGCLSS ISAKVRAIIQ TDISASWTLG AIALRLHMSE SLLKIKLKNE GHMFSRLLLE ERMRVAVNML CSRHGYGQAV AEKCGYSSWS YFISVFHRYY GFPPDRYVSR QGLDY
|
| |