| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1065 |
|---|
| Symbol | |
|---|
| ID | 6970502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1086608 |
|---|
| End bp | 1087465 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643385077 |
|---|
| Product | formate transporter |
|---|
| Protein accession | YP_002269576 |
|---|
| Protein GI | 209397014 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2116] Formate/nitrite family of transporters |
|---|
| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.187921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAGCTG ACAACCCTTT TGATCTTTTA CTTCCTGCTG CAATGGCCAA AGTGGCCGAA
GAGGCGGGTG TCTATAAAGC AACGAAACAT CCGCTTAAGA CTTTCTATCT GGCGATTACC
GCCGGTGTTT TCATCTCAAT CGCATTCGTC TTCTATATCA CAGCAACCAC TGGCACAGGC
ACAATGCCCT TCGGCATGGC AAAACTGGTT GGCGGCATTT GCTTCTCTCT GGGACTGATT
CTTTGTGTTG TCTGCGGAGC CGATCTCTTT ACTTCCACAG TGTTGATTGT TGTTGCTAAG
GCGAGTGGGC GCATCACCTG GGGTCAGTTG GCTAAAAACT GGCTAAATGT CTATTTTGGC
AACCTGGTCG GCGCACTGCT GTTTGTACTT TTAATGTGGC TTTCCGGCGA GTATATGACC
GCAAATGGTC AATGGGGACT AAACGTCCTA CAAACCGCCG ACCACAAAGT GCACCATACT
TTTATTGAGG CCGTCTGCCT TGGTATCCTG GCAAACCTGA TGGTATGTCT GGCAGTATGG
ATGAGTTATT CTGGCCGCAG CCTGATGGAC AAAGCGTTTA TCATGGTGCT GCCGGTCGCG
ATGTTTGTTG CCAGCGGTTT TGAGCACAGT ATCGCAAACA TGTTTATGAT CCCGATGGGT
ATTGTAATCC GCGACTTCGC ATCTCCGGAA TTCTGGACCG CTGTCGGTTC TGCACCGGAA
AATTTTTCTC ACCTGACCGT GATGAACTTC ATCACTGATA ACCTGATTCC GGTTACGATC
GGTAATATTA TCGGCGGTGG TTTGTTGGTT GGGTTGACAT ACTGGGTCAT TTACCTGCGT
GAAAACGATC ACCATTAA
|
|---|
| Protein sequence | MKADNPFDLL LPAAMAKVAE EAGVYKATKH PLKTFYLAIT AGVFISIAFV FYITATTGTG
TMPFGMAKLV GGICFSLGLI LCVVCGADLF TSTVLIVVAK ASGRITWGQL AKNWLNVYFG
NLVGALLFVL LMWLSGEYMT ANGQWGLNVL QTADHKVHHT FIEAVCLGIL ANLMVCLAVW
MSYSGRSLMD KAFIMVLPVA MFVASGFEHS IANMFMIPMG IVIRDFASPE FWTAVGSAPE
NFSHLTVMNF ITDNLIPVTI GNIIGGGLLV GLTYWVIYLR ENDHH
|
|---|
| |