Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_0378 |
Symbol | |
ID | 6970160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 387739 |
End bp | 388827 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643384433 |
Product | LuxR-family transcriptional regulator/cyclic diguanylate phosphodiesterase (EAL) domain protein |
Protein accession | YP_002268948 |
Protein GI | 209396993 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.200626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCGC ATGATTTGAG TGTTTTTTTG GAAGAGTTCG GGGCAACGGT GAATTTGACG TTGCCTGGTA TCGTGTCCGA AAAAGAACGG CTTTTACTCA AGCTGCTAAT GGAGGGAATG TCGGTTACAG AAATCTCACA GTACAGAAAT CGCAGTGCAA AGACAATTTC ACATCAAAAG AAGCAGCTGT ATGAAAAACT AGGCATCCAG AGTGATATTA CCTTCTGGCG GGATATCTTT TTTCAATATC ATCCGCAAGT CATTAGTGGC ACGGGAAATA AAAATAATTT TTATATCCCT GATAACCGTT GTCACCATAT CGTCACGCCT GAAGCCATCA GTCTGGCGTT GGAAAACCAT GAATTTAAAC CGTGGATCCA ACCGGTTTTC TGCGCGCAGA CTGGGGTACT GACGGGCTGT GAAGTGCTTG TCCGCTGGGA ACATCCACAA ACGGGAATCA TCCCGCCGGA TCAGTTTATT CCTCTGGCGG AGTCATCCGG TCTTATTGTC ATAATGACCC GCCAACTGAT GAAACAGACT GCGGATATTC TGATGCCGGT AAAACATTTG CTGCCGGATA ATTTCCATAT TGGTATCAAC GTCTCGGCGG GTTGTTTTTT GGCCGCGGGA TTTGAAAAAG AATGCCTGAA CCTGGTCAAG AAATTAGGAA ACGATAAAAT CAAACTGGTT CTCGAGCTAA CGGAACGTAA CCCTATTCCG GTAACGCCAG AAGCCAGAGC GATATTTGAC AGCCTTCATC AGCATAACAT TACCTTTGCG CTGGATGACT TTGGTACGGG TTATGCGACC TATCGTTATC TGCAGGCGTT TCCGGTCGAT TTTATTAAGA TCGATAAGTC ATTTGTGCAA ATGGCGGGTG TCGACGAAAT ATCCGGTCAT ATTGTGGACA ATATTGTCGA ACTGGCGCGT AAGCCTGGTC TGAGTATCGT GGCGGAAGGG GTAGAAACCC AGGAGCAGGC GGATTTAATG ATCGGTAAAG GCGTTCACTT TTTGCAGGGC TATTTGTACT CTCCGCCAGT ACCGGGTAAT AAATTTATCT CTGAATGGGT AATGAAAGCA GGTGGTTGA
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Protein sequence | MASHDLSVFL EEFGATVNLT LPGIVSEKER LLLKLLMEGM SVTEISQYRN RSAKTISHQK KQLYEKLGIQ SDITFWRDIF FQYHPQVISG TGNKNNFYIP DNRCHHIVTP EAISLALENH EFKPWIQPVF CAQTGVLTGC EVLVRWEHPQ TGIIPPDQFI PLAESSGLIV IMTRQLMKQT ADILMPVKHL LPDNFHIGIN VSAGCFLAAG FEKECLNLVK KLGNDKIKLV LELTERNPIP VTPEARAIFD SLHQHNITFA LDDFGTGYAT YRYLQAFPVD FIKIDKSFVQ MAGVDEISGH IVDNIVELAR KPGLSIVAEG VETQEQADLM IGKGVHFLQG YLYSPPVPGN KFISEWVMKA GG
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