Gene ECD_03788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03788 
SymbolrhaD 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp4001646 
End bp4002470 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content55% 
IMG OID 
Productrhamnulose-1-phosphate aldolase 
Protein accessionACT45581 
Protein GI253979911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACA TTACCCAGTC CTGGTTTGTC CAGGGAATGA TCAAAGCCAC CACCGACGCC 
TGGCTGAAAG GCTGGGACGA ACGCAACGGC GGCAACCTGA CGCTGCGCCT GGATGACGCC
GATATCGCGC CTTATAAAGA CAACTTCCAT GCACAACCGC GCTATATCCC GCTCAGCCAG
CCCATGCATT TACTGGCAAA TACACCGTTT ATTGTCACCG GCTCCGGCAA ATTCTTCCGT
AACGTCCAGC TTGATCCTGC AGCTAACTTA GGCGTCGTAA AAGTCGACAG CGACGGCGCG
GGCTACCATA TTCTCTGGGG GTTAACCAAC GAAGCCGTTC CAACTTCTGA ACTTCCGGCT
CACTTTCTCT CCCACTGCGA GCGCATTAAA GCCACCAACG GTAAAGATCG GGTGATCATG
CACTGCCACG CCACCAACCT GATCGCCCTC ACCTATGTAC TGGAAAACGA CACCGCGGTC
TTTACTCGCC AACTGTGGGA AGGCAGCACC GAGTGTCTGG TGGTATTCCC GGATGGCGTT
GGCATTTTGC CGTGGATGGT GCCCGGCACG GACGAAATCG GCCAGGCGAC CGCACAAGAG
ATGCAAAGAC ATTCGCTGGT GTTGTGGCCC TTCCACGGCG TCTTCGGCAG CGGGCCGACG
CTGGATGAAA CATTCGGTTT AATCGACACC GCAGAAAAAT CAGCACAAGT ATTAGTGAAG
GTTTATTCGA TGGGCGGCAT GAAACAGACC ATCAGCCGTG AAGAGTTGAT AGCGCTCGGC
AAGCGCTTCG GCGTTACACC ACTAGCCAGT GCGCTGGCGC TGTAA
 
Protein sequence
MQNITQSWFV QGMIKATTDA WLKGWDERNG GNLTLRLDDA DIAPYKDNFH AQPRYIPLSQ 
PMHLLANTPF IVTGSGKFFR NVQLDPAANL GVVKVDSDGA GYHILWGLTN EAVPTSELPA
HFLSHCERIK ATNGKDRVIM HCHATNLIAL TYVLENDTAV FTRQLWEGST ECLVVFPDGV
GILPWMVPGT DEIGQATAQE MQRHSLVLWP FHGVFGSGPT LDETFGLIDT AEKSAQVLVK
VYSMGGMKQT ISREELIALG KRFGVTPLAS ALAL