Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01462 |
Symbol | ydeS |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 1543790 |
End bp | 1544320 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | predicted fimbrial-like adhesin protein |
Protein accession | ACT43344 |
Protein GI | 253977674 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.998876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACA ATAACATTAT TTTCCTCGGT TTATGTCTGG GGTTAACCAC CTATTCTGCT TTATCCGCAG ATAGCGTTAT TAAAATTAGC GGGCGCGTCC TCGATTATGG CTGCACAGTC TCATCGGATT CGCTTAATTT TACCGTAGAT CTCCAAAAAA ACAGTGCCAG ACAATTTCCA ACGACCGGTA GCACAAGTCC AGCCGTCCCT TTTCAGATTA CGTTAAGTGA ATGCAGCAAA GGGACAACGG GGGTTCGGGT TGCATTTAAC GGTATTGAGG ATGCAGAAAA TAATACTTTG TTGAAACTGG ATGAAGGAAG CAATACGGCC TCCGGTTTGG GTATAGAAAT ATTGGACGCA AATATGCGTC CGGTGAAACT GAATGATCTT CATGCCGGGA TGCAGTGGAT CCCACTGGTA CCAGAACAGA ACAATATTTT GCCTTACTCC GCTCGTCTGA AGTCAACTCA GAAGTCCGTC AATCCGGGAC TGGTGAGGGC TTCGGCAACC TTTACCCTTG AATTTCAATA A
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Protein sequence | MKYNNIIFLG LCLGLTTYSA LSADSVIKIS GRVLDYGCTV SSDSLNFTVD LQKNSARQFP TTGSTSPAVP FQITLSECSK GTTGVRVAFN GIEDAENNTL LKLDEGSNTA SGLGIEILDA NMRPVKLNDL HAGMQWIPLV PEQNNILPYS ARLKSTQKSV NPGLVRASAT FTLEFQ
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