| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_3011 |
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| Symbol | |
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| ID | 4661984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008741 |
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| Strand | + |
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| Start bp | 69449 |
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| End bp | 70489 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639813931 |
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| Product | YscD family type III secretion protein |
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| Protein accession | YP_961210 |
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| Protein GI | 120586865 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.859866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA AGACCGAACA GCCAACACCC AAACGCCTGC GCGAGGCGCG CGAGAAGGGT
GACATCTGCA AGAGTCAGGA CATCGGGTCG GCGGTGACGG TGCTGGCGGT GGCAGGGTAC
TTCGCCTTCG CCGGAGAATC CATCTTCGCC TCGCTGATGG AGGTGACCGA ACTTTCGATG
CGCCACATGG CGATGCCCTT CGACGAGGCG CTGCCCCTTC TGGGCACGGC GGTGGTGCAT
GCCGCCGTGG GCATCGTGCT GCCGGTGGTG GGCCTTGCCA TGATGGCGGC GTTTCTCGGC
ACGCTGGCGC AGACGGGTGT GCTCTTCGCC TTCAAGGGGG CCATGCCCAA GCTTGAGAAC
ATCAGCCCCG GCAAGTGGTT CAAGAAGGTG TTCTCCATGC GCAACGCCGT AGAACTGCTC
AAGAACTGCA TCAAGGTGGG CGTTCTCGGC TGGGCGGTGT GGAAGGTGAT GTCCGACCAC
ATGCGCGGGC TGTTCGCCAT CCCCGACGGC GACATAGGGC TGCTGCTGAA GGTGCTGGGC
ACGGCGGCGC GCGACATGGT GCTCATGGCT GCCGTGGTCT TCTGCGTCAT CGCCGCGCTG
GACTATCTCT ACCAGCGCTG GCAGTACAAC AAGCAGCATA TGATGACCAA GGACGAGGTC
AAGCGCGAGT ACAAGGAGAT GGAGGGCGAC CCCCATATCA AGGGCAAGCG CAAGCAGTTG
CATCAGGAGA TGCTGGCACA GAACACGCTT TCGAACGTTC GCAAGGCGAA GGTCATCGTG
ACGAACCCCA CCCATTTCGC CGTGGCACTG GACTACGAGA AGGACAGGAC GCCGCTGCCC
GTCATCCTCG CCAAGGGCGA GGGTCTGATG GCGCGCCGCA TGGTGGAGAT AGCCCGCGAA
GAGGGCATTC CCGTCATGCA GAACGTGCCG CTGGCGCGTA GCCTCTTCGC CGAAGGCACC
GAGAACGCCT ATATCCCCAA GGAACTCATC GGCCCCGTGG CCGAGGTGCT GCGCTGGGTG
CAGTCGCTTC AGGAACGGTA G
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| Protein sequence | MSDKTEQPTP KRLREAREKG DICKSQDIGS AVTVLAVAGY FAFAGESIFA SLMEVTELSM
RHMAMPFDEA LPLLGTAVVH AAVGIVLPVV GLAMMAAFLG TLAQTGVLFA FKGAMPKLEN
ISPGKWFKKV FSMRNAVELL KNCIKVGVLG WAVWKVMSDH MRGLFAIPDG DIGLLLKVLG
TAARDMVLMA AVVFCVIAAL DYLYQRWQYN KQHMMTKDEV KREYKEMEGD PHIKGKRKQL
HQEMLAQNTL SNVRKAKVIV TNPTHFAVAL DYEKDRTPLP VILAKGEGLM ARRMVEIARE
EGIPVMQNVP LARSLFAEGT ENAYIPKELI GPVAEVLRWV QSLQER
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