Gene Dvul_2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2554 
Symbol 
ID4664148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2982075 
End bp2982752 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content53% 
IMG OID639820803 
Productcyclic nucleotide-binding protein 
Protein accessionYP_967997 
Protein GI120603597 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.531309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0738389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAC ATCTTGTCGA TGAATTCTGG TGCATCAACG TGGACAGCAC GGCATGGTCC 
AAGGTGCTTC ACCGTGGGAC CAGACGAGAG TTCAAGAAAG GTGAACAGAT CGTCAGTGCG
GGGGAGCTCG TGACCCAGCT CCGTTACCTT GAATCAGGGT CTGTATGTAT GAAACGTACG
ACACTGGACG GTAACGAGAA GATCCTCATG CACATCGAAC GGAGTTCACT CTTCTGCGAG
GTGCCATTCT TCACGGGTGA CGAGATCCAC AGCTCTTTCA ATTGCCATCG TGATGCCGTC
GTATACTGTT TTTCGAAAGA GGTGGTCGAC GACATACTCG AGATGTACCC GTGCATCGCA
AAGGACATCA TCCGTACGCT ATCCATGAAG GTCAGTGTAC TGAGCAACCA GATCGCATCG
CTAGGTCTCG ACACACTCGA ACAGCGCATA GCGAAGTTCA TACTGCTCCG CTACAACCTG
ATGAACCTTG CCGATGCAGA CCTCATGACA CTCGGGACAC TGCGCATGAA GGATGTGGCG
AGCATCCTTG GCGTACACAG GGCCACCCTC TACAGGGCAC TGAAGACCAT GGAGAAGATG
CGGCTGATCA AGCTGCTGAA CGAAAACAGG TTGCAGGTGC TGAACATAGA GGCGCTGGCC
GCTCTCGCCA ACCATTGA
 
Protein sequence
MQRHLVDEFW CINVDSTAWS KVLHRGTRRE FKKGEQIVSA GELVTQLRYL ESGSVCMKRT 
TLDGNEKILM HIERSSLFCE VPFFTGDEIH SSFNCHRDAV VYCFSKEVVD DILEMYPCIA
KDIIRTLSMK VSVLSNQIAS LGLDTLEQRI AKFILLRYNL MNLADADLMT LGTLRMKDVA
SILGVHRATL YRALKTMEKM RLIKLLNENR LQVLNIEALA ALANH