| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2452 |
|---|
| Symbol | |
|---|
| ID | 4663176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2855203 |
|---|
| End bp | 2856501 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639820700 |
|---|
| Product | phenylacetate--CoA ligase |
|---|
| Protein accession | YP_967895 |
|---|
| Protein GI | 120603495 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.601258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGC CGTACCGCTT TCTGCCCAGT CTCGACGAAG AGAAACTTCA CGCCATCCAG
CTTGAAGGCC TGCGCTGGAC GGTGCGCCAC GCCTACGAAG GCAGCCCGCG CTACCGTGCG
AAGCTGCGTG CCGCGGGCGT CGTGCCCGAC GACATCGTCC ATCTCGACGA TGTGCGCCGC
CTGCCCTTCA CCACCGTTGC CGACCTGCGC GACGACTACC CCCTGCCGCT GCTTTCCGTA
CCCGAGAAGG AGGTGGTGCG CATCCACGCC TCGTCGGGAA CCACGGGCAA GCGCAAGATA
CTGGCCTACA CCCAGCGCGA CGTAGACACC TTCGCACTGC AGATGGCCCG CTGCTACGAA
CTTGCGGGGC TGACACAGGA AGACCGTGTG CAGATTGCCG TGGGCTACGG GCTGTGGACA
GCCGGGGCGG GGTTCCAGCT AGGCTGTGAA CGCTTCGGTG CCCTCACCGT CCCGGTAGGC
CCCGGCAACC TCGAGATGCA GTTGCAACTG CTCACCGACC TTGGCGTCAC GTGCCTGTGC
TCCACGGCGT CCATGGCGCT GCTCATGGCG GAGGAGGTCG AACGTCACGG GCTGCGGGGC
GACATCAGGC TGCGCAAGGT CATCTTCGGG GCGGAGGCGC ACAGCGCCAA GATGCGCCGC
ACCTTCGAGG AGAAGCTGGG CCTCGAAGGC AGCTTCGACA TCGCGGGCAT GACCGAGATG
TACGGCCCCG GTACCGGTCT TGAGTGCGAG GCGCATGATG GCATCCATTA CTGGGCCGAC
CTCTTCCTCG TGGAGATTCT CGACCCCGAG ACGCTGCAAC CCGTCGAACC CGGCGAGGTG
GGCGAGATGG TGGTCACCTC GCTGCGCAAG GAGGCATCGC CGCTCATCCG CTACCGCACC
CGCGACCTCA CGCGCCTGAT TCCCGGCACA TGCTCCTGCG GGCGGAACAT CCCCCGCCAT
GACCATATCC TCGGACGTTC CGACGACATG ATCATCTTCC GCGGCGTGAA CATCTACCCC
GGTCAGATTG CCGATGTGCT GCACCTCTTC CCTGAGGTGG GCTCGGAATA CCATATCGAA
CTCACACGCA AGGAAGGGCG CGACCACATG CTGCTCAAGG TCGAACGGCA GCCCGGTGCC
GCGACGGGCG ACGAGCGCAC GCTTGGTGTC GCCATCGGCA ACGAACTGCA TCGCAAGCTC
ATGGCGCGTG TCTCGGTGGC GGTGGTGGCA CCCGGCGAGT TGCCCCGGTC GTTCGCCAAG
TCCAAGCGCG TCACCGACCT GCGTATGGTG GAAGGCTAG
|
|---|
| Protein sequence | MSQPYRFLPS LDEEKLHAIQ LEGLRWTVRH AYEGSPRYRA KLRAAGVVPD DIVHLDDVRR
LPFTTVADLR DDYPLPLLSV PEKEVVRIHA SSGTTGKRKI LAYTQRDVDT FALQMARCYE
LAGLTQEDRV QIAVGYGLWT AGAGFQLGCE RFGALTVPVG PGNLEMQLQL LTDLGVTCLC
STASMALLMA EEVERHGLRG DIRLRKVIFG AEAHSAKMRR TFEEKLGLEG SFDIAGMTEM
YGPGTGLECE AHDGIHYWAD LFLVEILDPE TLQPVEPGEV GEMVVTSLRK EASPLIRYRT
RDLTRLIPGT CSCGRNIPRH DHILGRSDDM IIFRGVNIYP GQIADVLHLF PEVGSEYHIE
LTRKEGRDHM LLKVERQPGA ATGDERTLGV AIGNELHRKL MARVSVAVVA PGELPRSFAK
SKRVTDLRMV EG
|
|---|
| |