| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2060 |
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| Symbol | |
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| ID | 4663813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 2400444 |
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| End bp | 2401850 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639820303 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_967503 |
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| Protein GI | 120603103 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.23059 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACAT TCGCAAACGG CATGACGCTC GACGTCACGG TCGATGCCCT CGCGCCGGGC
GGCAAGGCCG TCTGCCGCCA TGAAGGGCGC GTCATCTTCG TCGACCGCGG TCTGCCTGGC
CAGCAGCTTC GTGTCCGCCT CACGACTGTG CGCAAACGCT TCGCAGAGGC TGAATGCCTT
GCCGTTGTCA CTCACACCGC AGACGAGTGC GACCCGTTCT GCCCGCACTT CGGCGACTGT
GGCGGCTGCA CATGGCAGAA CCTGCCCTAC CCGGCCCAAC TGGCGTGGAA GGAACGCTTC
GTCCGTGACA GCCTGCAACG CATCGGGCGC ATCGAAGCCC CCAATGTACT GCCCACGCTC
CCTTCGCCGC TGCAACAGGG CTTTCGCAAC AAGATGGAGT TCGCCTTCAC CACGGATGGT
CGGGGAGCGC TTCATCTGGG ACTGCGCCGC CGGGGGGGTC ACGAGGTCGT GGATGTGACG
TCGTGCGGGC TTCAGACTGC CACAACCTGC CGCGTCGTCA CGACGGCACG TGACATCGCA
CGCGCATCGG GTCTTCCCGG CTGGGACGAC GCGGCTCATC GCGGCTTCTG GCGCTTTCTC
GTCGTGCGTG AGCCCGCAAG GGGGGGGCAG TGCCTCGTCC AGTGCATCAC CGCCCCGCAC
CCGGAGGCCG AACATGTCGT GCGTGCCTTT TTCACCGCCC TGCGTCAGGC AGTGCCGGAG
GTCACAGGCT GCGTCCACTC CATCCGCTCG CAGAACTCGC AAGTGGCTTA CGGCGACGCG
ACCGTCTTCA CCGAAGGTGA GATTGTACTG ACAGAAAAGC TGGGCGCCAT CGAACTCGAC
TTCGGGCACG ACACCTTCCT GCAGACCAAC ACCCGCGCCA CGGAACTCCT GTATGGCGAA
GTGGAGCGCA TGGCAGGCCT GAGCGGACGC GAACATGTCT GGGACCTCTA CTGCGGTGTG
GGTTCCATTA CCCTGTGGCT GGCGGAACAC GCAGCGACAA TCTGCGGCAT GGAGGCGACG
CCTGCATCCG TCGAAGCAGC CCAAAGGAAC GCGCAGGCAG CAGGCTGCAC CCACTGCGAT
TTCGTCGCCG GGGATGTACG GGCACTGCTC CGTTCTCGCA GCAAAGGCAA AGCTCAAGAA
CCCATCCCTG ACGTGGTGGT CACAGACCCC CCTCGCGCCG GCATGCATCC TGATGTGATA
GACGCACTTC TTCAGACGGC ACCGGCACGC ATCGTCTATG TATCATGCGA TCCAGCGACG
ATGGCTCGTG ACGTGGGCCT GCTCATGCAG CGCTATACGC TGCACGAAGC GCGCCCTGTC
GACCTTTTTC CGCATACGCC ACACGTCGAG ACGGTTGTCC TGCTCTCAAA CAAAGAAGTA
GACGATACAA TCAGCACGAC TGTATAG
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| Protein sequence | METFANGMTL DVTVDALAPG GKAVCRHEGR VIFVDRGLPG QQLRVRLTTV RKRFAEAECL
AVVTHTADEC DPFCPHFGDC GGCTWQNLPY PAQLAWKERF VRDSLQRIGR IEAPNVLPTL
PSPLQQGFRN KMEFAFTTDG RGALHLGLRR RGGHEVVDVT SCGLQTATTC RVVTTARDIA
RASGLPGWDD AAHRGFWRFL VVREPARGGQ CLVQCITAPH PEAEHVVRAF FTALRQAVPE
VTGCVHSIRS QNSQVAYGDA TVFTEGEIVL TEKLGAIELD FGHDTFLQTN TRATELLYGE
VERMAGLSGR EHVWDLYCGV GSITLWLAEH AATICGMEAT PASVEAAQRN AQAAGCTHCD
FVAGDVRALL RSRSKGKAQE PIPDVVVTDP PRAGMHPDVI DALLQTAPAR IVYVSCDPAT
MARDVGLLMQ RYTLHEARPV DLFPHTPHVE TVVLLSNKEV DDTISTTV
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