Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1162 |
Symbol | |
ID | 4663298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1418017 |
End bp | 1419138 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639819392 |
Product | diguanylate cyclase |
Protein accession | YP_966609 |
Protein GI | 120602209 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.332491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCCA TGAACGCTTC AGGTGTGCCG CGCCAGTCCC GCCCGCCCCG CGAAGGGATG CTCCTTTCGT CGGATGAAGC CTTCGTCGAG ACCGTGACCT CCCTGTGGCC CGAGGATGTC ATGCATTGGC AGGTGCTGCG TTCGGGTCGT GCCGCGCTGG ACATCATGTT CGTCACCCCT CCCGACCTGC TGGTCGTGGA CATGCGTCTT GCCGACCTGC CGGGGGATGC GGTGCTGCGC ATTCTCAAGA GCGAGAACGT GTACCGTCAG ATATGCGCGG TGCTGTGCAT GGATGAGGCG ACATTGCATG GCGGCATGGA CTGGGCGACC ACCGAGGCCG ACGACTTCGT GCTGCTGCCT GCCACCGTGG TGGAACTGCG GGCCCGGCTG GAATTGGCCA TGTTGCGCGC CACGCGAACG CTCGACGCCA ATCCGCTCAC GCATCTTCCG GGCAACACGT CCATCCTGCT CGACATCCAG ACACGCATCG ACAGGGGCGA AGACTTCGGC CTCGGCTACG CCGATTTGGA CAACTTCAAG GCGTTCAACG ACAAGTACGG CTTTTCGCGC GGCGACGAGG CGCTGATGAT GACGGCGCGT ATCATCGTCA ACACCGTCCG TGCCGTGGCA TCGGGCAGTT CTTCGTTCGT GGGGCATGTG GGCGGTGACG ACTTCGTCTT CATGCTGCCC GCGGCGTTGA TGGAGTCCGC CTGTCGCACC ATCGTGTCAC GCTTCGACGC CATCGTCCCC AGCTTCTACG ATGATGACGA CCGCGCACGA GGTTGTATCG TCTCCACGGA TAGGCAGGGC GACGTGCGCA CCTTCCCTCT CATGGCCATC TCCATCGCCG TGGTGTTCAA TCATGAAGGC TGCCTGCAGC ATGCGGGGGA AGCCTCGCAT CGTGCCGGTC AGATGAAGAA GAAGGCCAAA GCCATGCCCG GCAGCAGCTA TGCTCTCGAC AGGCGTTGCT ATGGCGACGT CTCGTCCGCT GACGGCACGG CGAAAGGCGT GCCGCCGACC ATACCCGCAC AACGCGACAT GTACGACGAC AGTGACGGGA TGGGCGATGA GGTCGATGGG GTCGACGGAG GCGGCAATCG CCACGGCGGT GCGCATGGCT AA
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Protein sequence | MDAMNASGVP RQSRPPREGM LLSSDEAFVE TVTSLWPEDV MHWQVLRSGR AALDIMFVTP PDLLVVDMRL ADLPGDAVLR ILKSENVYRQ ICAVLCMDEA TLHGGMDWAT TEADDFVLLP ATVVELRARL ELAMLRATRT LDANPLTHLP GNTSILLDIQ TRIDRGEDFG LGYADLDNFK AFNDKYGFSR GDEALMMTAR IIVNTVRAVA SGSSSFVGHV GGDDFVFMLP AALMESACRT IVSRFDAIVP SFYDDDDRAR GCIVSTDRQG DVRTFPLMAI SIAVVFNHEG CLQHAGEASH RAGQMKKKAK AMPGSSYALD RRCYGDVSSA DGTAKGVPPT IPAQRDMYDD SDGMGDEVDG VDGGGNRHGG AHG
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