Gene Dvul_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1110 
Symbol 
ID4662545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1349801 
End bp1351015 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content66% 
IMG OID639819339 
Productresponse regulator receiver protein 
Protein accessionYP_966557 
Protein GI120602157 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4963] Flp pilus assembly protein, ATPase CpaE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.129352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0915857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA TCCATCCCGT TTGCCTCATG CCGAAAAGCC CCGTGACGGG TGACGAACTC 
GCCATTCTCG TCACGCGGCA GGGCGGATTC AGGCTTGTGT CGCCCGAAGA GGATGAACTC
GGGCTGGTCA TCGTCGAACT GGGGCGGGCC TCTGACAACG ACTTCGACCT TCTTCGCAAA
CTCGACGCCG ACCCGCGCGT CACCGAAATA TTCGTCACCG CGCGCAAGAA GGACCCCGAC
CTCATCATCG AAGCCATGCG CGCCGGGGCC ACAGAGTTCA TGGCCCAGCC GCTTCGCCCC
GAAGACATGA GCGCAGCCCT CGAAGGCTAC CTCATGCGAT GCCGCACCCG TGAGGCACAT
CCTGTCGCCA CCAGCGAAGA GGGCGGGCGC ATCGTCCATG TCGTCTCGGC CAAGGGCGGC
GTTGGCGGCA CGACCGTGGC CGCGAGTCTC GGCGTGCTGG CAGCGCAGCG CGGAGAGACC
GTTCTCATGG ACATGCGGCT GCCACAGGGC GACGTGCCTC TCTTTCTCGA CCTCGCCTAC
ACCCACACAT GGGCATCGGC CATGCGCGAC CTGGCACGCC TCGACGCGAC CTTCCTGCGA
AGCCTCGTCG AACGCCACTC CAGCGGGCTG CATGTACTGC CCTCGCCCGA CAGACAAGAC
GGACTTGAGA GCCTGAGCGC CCTCGGCGTG AAAGCCATGC TGGGCCTCAT GCGCGCCACC
TTTCCCACCA CCATCGTCGA TGGTGGCCCC TTCAGCGACG AACTTGCGCT GGCTTCCATG
CAACAGGCCG AGAGCATTCT GCTGGTCACT GAACTGGCAC TGCCCTCCCT CTCCGGGGCA
CGGCGCATCC TCGATGACAT CCGCCAACAC GCGCCACAGG TCGAAGACAG GGTCCGACTT
GTGGTGAACA GGTTGTGCTC GCGTTCTGGC GTCGAGGCCG AAGAGGCCGA ACAGCTTCTT
GAGCGCAAGG TCTTCTGCGC CATCCCCGAC GACTACAGCA ACGCCGTCTC CGCCATCAAT
CAGGGCGTGC CGCTGGTCAC AGCGCATCCG CGTTCAGCGG CAGCCCGCGC CCTGCAACAG
CTGGGCGAAC GTACGTTCCC GCAGGAAGGG GCCGATGCAC GGCCGGGCGG CCTTTTCGCA
CGCCTCCTCC GCCGGGGTGA AGCGGGGCAG GCATCCGTGC CCCAGACCCC GCTGCTGCAC
GGGTCGAGGG GGTAG
 
Protein sequence
MNNIHPVCLM PKSPVTGDEL AILVTRQGGF RLVSPEEDEL GLVIVELGRA SDNDFDLLRK 
LDADPRVTEI FVTARKKDPD LIIEAMRAGA TEFMAQPLRP EDMSAALEGY LMRCRTREAH
PVATSEEGGR IVHVVSAKGG VGGTTVAASL GVLAAQRGET VLMDMRLPQG DVPLFLDLAY
THTWASAMRD LARLDATFLR SLVERHSSGL HVLPSPDRQD GLESLSALGV KAMLGLMRAT
FPTTIVDGGP FSDELALASM QQAESILLVT ELALPSLSGA RRILDDIRQH APQVEDRVRL
VVNRLCSRSG VEAEEAEQLL ERKVFCAIPD DYSNAVSAIN QGVPLVTAHP RSAAARALQQ
LGERTFPQEG ADARPGGLFA RLLRRGEAGQ ASVPQTPLLH GSRG