Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1076 |
Symbol | |
ID | 4663569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1305611 |
End bp | 1308535 |
Gene Length | 2925 bp |
Protein Length | 974 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639819301 |
Product | tail tape meausure protein, putative |
Protein accession | YP_966523 |
Protein GI | 120602123 |
COG category | [S] Function unknown |
COG ID | [COG5281] Phage-related minor tail protein |
TIGRFAM ID | [TIGR01541] phage tail tape measure protein, lambda family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAA ATCCTAGTAC GCGCATCACC ATAGAGACCG AAGATAAGGC CTCCAACGCC ATACGCCGCA TCGCCATGGA GCTTGGGGCG CTGGGTACAA GTGCCGAAGG CGTGGGGCCG CGTGCCCGTG CCGGCACGGA TGCCATGAGC GCCTCGTTCG ACCGTCTTGC CCTCCAGCTT GCGGCCGCAG TGTCGGGCTA CAAGGCCCTC GAAGCGGCAG TGGACTTCGG GCGCCGCGGC TTCAACTTCA ACGCACAGTG GGAAGAATCG CGCATCGGCA TCGGGTCGGT CATCGCAGCG GTCAACACCC TGACCACGGC GCAGGGACGC ACCCTCGTGG GCATGGAGAA GTACAACGCC GCACAGCAGA TTGCCGAACA GTCCATGCGC CGTATTCAGG TGATGGGCCT TGAGACGACG GCCACCACCG ACCAGCTGGT GGAGGGCTTT CAGGCCCTCA TCGGCCCGGC GTCTGCCGTG GGTATGACGC TGGACCAGAC GGCGGATTTC ACGCTGGCGG TGGTGCAGTC TCTTGGTGCG CTTGGCATTC CCCTCAACCA GCTTTCCGCA GAGGCCCGCA GCCTGCTTGA TGGCACCATC GTTCCCACGC AAGACCGCCT CGCCGTGGCC CTCGGCATCA CGGGCGAGAT GGTGAAGACG TGGAAGCAGC AGGGTACACT GGTCGCAGAA CTGAACAAGC GGCTCGAATC GTTCAAACTC GCGGGCAAGG ATGTTGCCGA CACGTGGTCT GGCCTGTCGT CCAACATGCA AGATGCCCTT GGCTTTCTGT CAGGTCAGAC AGGGCGCGGT CTGTTCGATG GAGTCAAGCA GTCGTACCGC GAACTGCTGG TCGAACTTGT CGATTCCAAA AACCTGCGGG CCGGTTCGGG CGTGGAGAAC ATCGTCGACA GCCTGCGGCG TCTGAATGAC GTGTTGGGCG GGGGCGTCAT CACCCTCACG CGTGAGTTCA TCGACAAGCT GCATGAGTTG AATGAACCTA ATGCGCTCAT GGGCGTGGAA AAGACGCTGA CGAACATCGC CCACACGGGT GGGCGGGCAC TCTCCATCGT TGGCGGCGTA GGTTCTGCAG TCGGCGGGCT GATTTCCACG ACGCTTGACG GTTGGAATAG CCTGCCGGAG GTGGTGCAGG ATGTGGGCAT CATCGGCGCT ATCGTGGGAG GTGCCAAAGC CAGGGCTGCA TTGGTAGGCG TTGGCCTTGC CGTGGAGGGC GTGCAGAGGC TGTTGGAAAT GGGGCATGAC TTTCGCGCCG TGTCTTCTGG TAACGCCACC ATGGAGCAGG AGATAAGGGT TCTGGAGCAG GAGATATCGT CCGCACAGCA AGACCCGAAT TACCACATGT CCGGCAGTGC TCGTCCGCTG GATGAGATGC AACGGCGTTT GGCCTTGCTC AAGTCTCAGC GGGATACCAT GAAGACAGTG GTCAGAAGTG CCACGGGTGA TTCCGTGAGT GCTTTCACCC AAGATTTCTC TGCCCGCGAC AGGGCCATGG ATGCGGCGTT CAAGGCATCC ACGACGGCCG GTCTCGTCAT CACGGGTCCC ACGCGCACCT CGACCGACAC CAAGGGTGCG TCGAAGATCG CCTCGGCCAC CGAATCCATC ACCGAGAAGC TCGCCCGCTA TGGCGACACG GGCACCGAAG GGCAGGGCCG CATAGCCAGG CTGACGAAGG AATATGATGC CTTCGCCAAG GTGCTTGGCG CGACGAATCC GCAGGTGCGG GCCTTTGCCG ATGTCATGGA GTACGCCAAG CAGCACAACG GGTTCACGCC CGAAGAGGTG GCCAAGTCCA CCCGTGCGGT AGAGCTTGAG ACGCAAGCCC TTGAAGACAG GGCAGAGGCC ATCCGGGCCG CCACCCGCGA TGACGGCACC ATCGACCAGC AGAAGCTGTC GATGCTCACC ACCACGGCGG CTGCCGAACG CGAGTACCGG GCAGACCTCT TGAAGGGCAT CGACGAGACG GTGGCGGCCC GCAAGCGCGA ACTGACGGTG GAGGCGGCGC ACGCCGCCGT GGTGCAGGAA AACCTGCAGG CACGCATCGC CTTCTACGAC GAGCTGGCCC AACTCTACCG CAACGACGAG GCCCTGCAGA TGCGGTCGCT GAACAAGCGG CTTGAAGATT TCCGCGCGGC CGGAGTCGCC GAGGCAGACA TACAGCGATG GCTTGACCGC AAGCGCCTGC AATCGGCCAC CGATGCCTAC AGCGGCATGA GGCGCGTCAC CATCGAATAC TACGAGGCCT CCACCAATGC GGCGGCCATC ATGGGTGACG CCTCCTCGAA GGTCATCTCG GGCATTGAGG ACGGCATCGT GGGCACGTTG CGTCGCAGCG GCAACGCTTG GGAGGACTAC GGCAACCTCG TGCTCGACAT CCTCGCCCGC ATCGCGGCCA AGGGGATGGT GACGCAAGCC ATGGGTATGT TCGGCATGGG CGGTGGCGGT AGTGGTGGCG GTCTTTTTGG CGGGCTGTTC AGCGGCATCA TGGCCGGATT CAGCGGCGGC GCGGGCGGCA CAGGCGGTGC AGCAAGCGGG GCGTGGGGCA GCTACGCCGA CCGTGTCGTG GGCATCGCTG GCACGCGTGC CGAGGGCGGC CCCGTGTTCG CGGGCAAGAC CTACCTCGTT GGCGAGCGTG GCCCGGAACT CTTCCAGCCC GGCGCAACCG GTGCCATCCA TCCCAATCAG ACGCTGAACT CCCTGTCTTC GCGGCAGGGT GGTTCGTCCG CGTCAGAAAC GCGCATCGCC ACTGCTCTCG AAAAGCTTGC AGAGAAGCGC GACGACGTCC GCATTGTCAA CGTCGTCGAC GAGTCGGTGG TGCATGGGGC GCTGTCGTCA CCGGGCGGCG AGCGCGTCAT CCTCAACGTC ATTCGCAAAA ACTCGGCGGC CATCGGCCAG ATGACCCGGA GGTAG
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Protein sequence | MAANPSTRIT IETEDKASNA IRRIAMELGA LGTSAEGVGP RARAGTDAMS ASFDRLALQL AAAVSGYKAL EAAVDFGRRG FNFNAQWEES RIGIGSVIAA VNTLTTAQGR TLVGMEKYNA AQQIAEQSMR RIQVMGLETT ATTDQLVEGF QALIGPASAV GMTLDQTADF TLAVVQSLGA LGIPLNQLSA EARSLLDGTI VPTQDRLAVA LGITGEMVKT WKQQGTLVAE LNKRLESFKL AGKDVADTWS GLSSNMQDAL GFLSGQTGRG LFDGVKQSYR ELLVELVDSK NLRAGSGVEN IVDSLRRLND VLGGGVITLT REFIDKLHEL NEPNALMGVE KTLTNIAHTG GRALSIVGGV GSAVGGLIST TLDGWNSLPE VVQDVGIIGA IVGGAKARAA LVGVGLAVEG VQRLLEMGHD FRAVSSGNAT MEQEIRVLEQ EISSAQQDPN YHMSGSARPL DEMQRRLALL KSQRDTMKTV VRSATGDSVS AFTQDFSARD RAMDAAFKAS TTAGLVITGP TRTSTDTKGA SKIASATESI TEKLARYGDT GTEGQGRIAR LTKEYDAFAK VLGATNPQVR AFADVMEYAK QHNGFTPEEV AKSTRAVELE TQALEDRAEA IRAATRDDGT IDQQKLSMLT TTAAAEREYR ADLLKGIDET VAARKRELTV EAAHAAVVQE NLQARIAFYD ELAQLYRNDE ALQMRSLNKR LEDFRAAGVA EADIQRWLDR KRLQSATDAY SGMRRVTIEY YEASTNAAAI MGDASSKVIS GIEDGIVGTL RRSGNAWEDY GNLVLDILAR IAAKGMVTQA MGMFGMGGGG SGGGLFGGLF SGIMAGFSGG AGGTGGAASG AWGSYADRVV GIAGTRAEGG PVFAGKTYLV GERGPELFQP GATGAIHPNQ TLNSLSSRQG GSSASETRIA TALEKLAEKR DDVRIVNVVD ESVVHGALSS PGGERVILNV IRKNSAAIGQ MTRR
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