Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1045 |
Symbol | |
ID | 4664399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1280720 |
End bp | 1282762 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639819270 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_966492 |
Protein GI | 120602092 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTAACA TTCCGCAGCA TCAGTCCCGG GCGGCATGGC TCCGAGCCGA ATTGGCACGG CACAACCGCC TCTACTACGA GCTCGATACG CCCGAGATAA GCGACGCCGA ATACGACACC CTCTATCGTG AACTCGTCAA CCTTGAAACG CTCTGGCCCG CATTGATGGA CGAGGCATCG CCCACGCAGA GAGTCGGCGG CGAAGTCCTC GATAGGCTTG AGAAGCAGGC GCACACCATG CGTATGTACA GCTTGGACAA CGCCTTCTCC CGCGACGAGT GGGGGGCGTT CATTCAACGC ATGTACAATA CCCTGCCCGA AACCCCTTCG TCCTTCTGGT GCGACCCCAA GATGGACGGT CTCGCACTGG AGGTCATCTA CGAGAATGGC GTCTTCACGT CGGCGTTGAC GCGGGGCAAC GGCGCAGAGG GTGAGGTCGT CACCGCTGCC ATGAGGACGG TGCGCAACCT GCCTCTTCGC CTACGAGGAA ACAATGTGCC GCACCGCCTT GAGGTTCGCG GCGAGGTGGT CATCGCCAAG GCCGATTTCG AGCAACTCAA CGCGCGGCAA TCCGCAGTCG GTGGCAAGGT TTTCGCCAAC CCGCGCAATG CTGCCGCGGG GTCAGTGCGG CAGCTCGACA CGTCTATCAC CGCTGGAAGA CCTTTGCAGT TTCTCGCCTA CGGGGTGGGA CAGGTGGTTC TCGATGGTGG CACCGCGCCG TGGACGACCC ATAGCGACCT CATGGCGCGG CTTCGTGAAT GGGGGTTTGA CTCGCCCCCG GAAGGTCGTC TGTGCACATC GCCGGACGAG GTGTGGGCCT ACTACGAGAT GCTCGGCGCA CGCCGCGAGT CGCTTGCCAT CGAAATAGAC GGCGTTGTCG CAAAGGTTGA TGACACCGAG GCGCAAGAAG CCCTTGGCTT CACGGCGCGT GCTCCACGGT GGGCACTGGC CCTCAAGTTT CCTGCAATGC AAGTGCGCAC TCGTCTACAG GACATTCGCG TGCAAGTGGG ACGAACTGGG GTGCTCACAC CTGTAGCGAT ACTTGAGCCT GTGCGCGTTG GTGGGGTCGA GGTGTCACGA GCCACGCTCC ATAACGCCTA TGAGATCGAA GACAAGGGCC TGATGCTTGG CGACATGGTG CTGGTGCAGA GGGCTGGCGA CGTCATCCCC GAAGTCGTGC GCCCCTTAGT CGAAGATCGC ACGGGTGGCG AACGCCCCTT CGTTTTCCCG ACAACCTGCC CTGAATGCGG AAGCGTCGTA CACAAACCCA ACGACGAAGT TGCACACCGA TGCATTAACG TCTCGTGTCC TGCTGTGCGC AGACAATCCA TCATCCATTT CGTTTCCAAG GCAGGCCTCG ATGTGCGCGG CTTCGGCGAG CACATCGTGC AGCAACTAGT CGATGCTGGC CGCGTGACGA CGGCTGCGGA TCTGTTCTCG CTTACAACGG TCGACCTGAT GGGTTTTGAA CGCATGGGGC CGACATCAGC TGCAAACGCA ATCGCATCTC TTGACGCTGC ACGCACAGGG GCAACGCTTG CCAGGCTCAT CTGCGCACTA GGCATCCGTC ATGTCGGCGA GCAGACGGCG CGGACTCTTG CCACGCACTT CGTAGATCTT GATGCCATGC GAAAGGCCGA CGGCGAAAAA TTGCTGCACC TGCCTGACAT TGGCCCAGAG GTTGCCGCAT CCATTCGCTG TTTCTTTGAC AACCAGAGCA ACATCGAGCT GCTTGAACAA CTACGCGACA AGGGGCTGTG GCCTCGGAAG CCCGATGCCA ATGGACCATT CGTCCGCGAG GGTAGCCAAC TCCAAGGGCT GAAGCTGCTT TTCACAGGGA GTTTGCAACG CATGAGCCGC AGCGAGGCCA AACGCATGGC TGAAGCTGCA GGGGCGCATG TTGTCTCCAA TGTATCAAAG TCCCTCGACA TGATTGTGGC TGGTGCCGAC GCTGGCTCCA AGCTGGATCA GGCCAAATCC CTCGGCCTAC ACGTCATTGA TGAAGACGCA TTCGCCAACC TGCTGAAAGG GCTAGACCGC TGA
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Protein sequence | MCNIPQHQSR AAWLRAELAR HNRLYYELDT PEISDAEYDT LYRELVNLET LWPALMDEAS PTQRVGGEVL DRLEKQAHTM RMYSLDNAFS RDEWGAFIQR MYNTLPETPS SFWCDPKMDG LALEVIYENG VFTSALTRGN GAEGEVVTAA MRTVRNLPLR LRGNNVPHRL EVRGEVVIAK ADFEQLNARQ SAVGGKVFAN PRNAAAGSVR QLDTSITAGR PLQFLAYGVG QVVLDGGTAP WTTHSDLMAR LREWGFDSPP EGRLCTSPDE VWAYYEMLGA RRESLAIEID GVVAKVDDTE AQEALGFTAR APRWALALKF PAMQVRTRLQ DIRVQVGRTG VLTPVAILEP VRVGGVEVSR ATLHNAYEIE DKGLMLGDMV LVQRAGDVIP EVVRPLVEDR TGGERPFVFP TTCPECGSVV HKPNDEVAHR CINVSCPAVR RQSIIHFVSK AGLDVRGFGE HIVQQLVDAG RVTTAADLFS LTTVDLMGFE RMGPTSAANA IASLDAARTG ATLARLICAL GIRHVGEQTA RTLATHFVDL DAMRKADGEK LLHLPDIGPE VAASIRCFFD NQSNIELLEQ LRDKGLWPRK PDANGPFVRE GSQLQGLKLL FTGSLQRMSR SEAKRMAEAA GAHVVSNVSK SLDMIVAGAD AGSKLDQAKS LGLHVIDEDA FANLLKGLDR
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