Gene Dvul_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0723 
SymbolaroK 
ID4662778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp889716 
End bp890258 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content61% 
IMG OID639818941 
Productshikimate kinase 
Protein accessionYP_966173 
Protein GI120601773 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACAC GACGTGAAGG CGCACGACTT TTTGAAGGAT GCTGCGTAAC CATCATCGGC 
ATGGCCGGTG CAGGCAAGAC GACAGTGGGA AGGGAACTTG CACGCCAGAT GGACTGGGCA
CATGTGGACA CGGACAGCCT CATCGAGGCG ACGTACGGGA CAGTACTCCA GAATGTGGCC
GACAGCATGA GCAAGGAAGC CTTCCTCGAT GTGGAAGCCG GCATCATCTG CCGCATCGGG
GCGAAACGGG CTGTCCTTTC CACGGGTGGC AGCGTCGTCT ACCGGGCAGA GGCCATGCGC
CATCTCGCGT CACTGGGCCC GGTCGTCTAT CTTGATGTCT CGCTGCCGCT CATCCTCGAA
CGCATCGCCC GCAACCCCGA CAGGGGCCTC GCCATCGCAC CGGGGCAGAC CATCGAAGAC
CTCTACAACG AACGCAAGGC CCTGTACGAA ACGTATCAGG ACTTCACCCT GACCGCCGAT
ACCCTCACGC CCGAGGAATG CGGTCGCGCC ATCCTGTCAT GGCTGGAGAC GGCAGATGCC
TAA
 
Protein sequence
MMTRREGARL FEGCCVTIIG MAGAGKTTVG RELARQMDWA HVDTDSLIEA TYGTVLQNVA 
DSMSKEAFLD VEAGIICRIG AKRAVLSTGG SVVYRAEAMR HLASLGPVVY LDVSLPLILE
RIARNPDRGL AIAPGQTIED LYNERKALYE TYQDFTLTAD TLTPEECGRA ILSWLETADA