Gene Dvul_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0417 
Symbol 
ID4663138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp533636 
End bp535348 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content63% 
IMG OID639818621 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_965867 
Protein GI120601467 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC AGAACCCGAA CGTTTCCGAA CGAACCACCG AGGCGACTCC CGGCCTCGAC 
TTCGTGCGCA GCCGCGTTGT CGCCGACAAC AGAACGGGCC GTTTCGACGG TCGCGTACAC
ACGCGCTTTC CCCCGGAACC CAACGGCTAT CTGCATATCG GGCACGCCAA GTCCATCTGC
CTCAATTTCG GCATAGCGAA CGAATACGGC GGCAAGTGCA ACCTGCGTTT CGACGACACC
AACCCTGTCA AGGAAAGCCG GGAATACGTC GACTCCATCC GCACCGACGT GGCATGGATG
GGCTTTTCGT GGGACGACCG TGAATTCTAC GCCTCGAACT ACTTCGAACA ACTCTACCAG
TTCGCCGAAC AGCTCATCAT GGCTGGCAAA GCCTACGTGG ACAGCCTCTC CGCCGAGGAG
ATACGCGCCC ACCGGGGTAC GCTCACGCAA CCCGGCACCG AAAGCCCCTA CCGCAACCGC
AGCGTTGAAG AGAACCTCGA CCTCTTCCGC CGCATGAAGG CGGGCGAATT CGCCGACGGT
GCCCATGTGC TGCGCGCCAA GATAGACATG GCTTCGCCCA ACGTGGTCAT GCGCGACCCT
ACGCTGTACC GCATACGCCA TGCCCACCAC CATCGTACCG GCGATGCGTG GTGCATCTAC
CCCATGTACG ACTTCACGCA CTGCATCTCC GACTCGCTTG AAGGCATCAC GCACTCCATC
TGCACCCTCG AATTCGAGAA CAACCGCGAA CTGTACGACT GGACGCTCGA TGCCCTCGGC
GTCTACCACC CGCAGCAGAT AGAGTTCGCC CGGCTCAACC TCACCTACAC GGTGCTGTCC
AAGCGCAAGC TCATCCAGCT TGTGGAAGGC GGCTTCGTGA AGGGATGGGA CGACCCGCGC
ATGCCCACCA TCAGCGGCTT GCGCCGTCGC GGCGTGCCCC CCGAGGCGCT ACGCGAATTC
TGCGCCCGCA TCGGCGTCGC CAAGGCGGAC AGCACGGTCG ACTACGGGCT GTTCGAATTC
TGCATCCGCG AACGCCTCAA CGCCACCACC CCCCGCGTCA TGGGCGTTCT CGACCCCATT
CGCGTGGTCA TCGAGAACTA CCCCGAGGGA CAGGTCGAAG AGTTCGACAT GCCCTACCAC
CCCGAAGACG CGTCCTTCGG TTCGCGCATA GTGCCCTTCT CGCGCGTACT GTACATCGAA
CGTGACGACT TCAGGGAAGA CCCGCCCAAG AAGTTCTTCC GACTCGCCCC CGGTGCCGAA
GTGCGCCTGC GCTACGCCTA CTACATCACC TGCCGCGAGG TGGTGAAGGA CGAGGCGGGC
AACATCGTCG AACTTCGCTG CACCTACGAC CCCGAATCGC GCGGCGGTTC GTCGCCCGAC
GGACGCAAGG TCAAGGGGAC GCTGCACTGG GTCTCCGCCG CCCATGCCGT GGAGTCGGAA
GTGCGCCTCT ACGAGCAACT CTTCGCCGTA TCCGACCCCG ATGACGTGCC CGAAGGCGGT
GTCTTCACCG ACAATCTCAA TCCCGACTCG CTCAAGGTCG TCCGCGCCAT GCTCGAACCT
TCGCTGGGCG GCATCGAACC CGGCACCAAA GTGCAATTCG AGCGCATGGG CTACTTCTGC
GCCGACCCGG ACTCCGTGCC CGGTGCTCCC GTGTTCAACC GCACCGTGAC CCTCAAGGAC
ACGTGGGCGA AACTCGAGAA GAAGATGGGC TAG
 
Protein sequence
MSEQNPNVSE RTTEATPGLD FVRSRVVADN RTGRFDGRVH TRFPPEPNGY LHIGHAKSIC 
LNFGIANEYG GKCNLRFDDT NPVKESREYV DSIRTDVAWM GFSWDDREFY ASNYFEQLYQ
FAEQLIMAGK AYVDSLSAEE IRAHRGTLTQ PGTESPYRNR SVEENLDLFR RMKAGEFADG
AHVLRAKIDM ASPNVVMRDP TLYRIRHAHH HRTGDAWCIY PMYDFTHCIS DSLEGITHSI
CTLEFENNRE LYDWTLDALG VYHPQQIEFA RLNLTYTVLS KRKLIQLVEG GFVKGWDDPR
MPTISGLRRR GVPPEALREF CARIGVAKAD STVDYGLFEF CIRERLNATT PRVMGVLDPI
RVVIENYPEG QVEEFDMPYH PEDASFGSRI VPFSRVLYIE RDDFREDPPK KFFRLAPGAE
VRLRYAYYIT CREVVKDEAG NIVELRCTYD PESRGGSSPD GRKVKGTLHW VSAAHAVESE
VRLYEQLFAV SDPDDVPEGG VFTDNLNPDS LKVVRAMLEP SLGGIEPGTK VQFERMGYFC
ADPDSVPGAP VFNRTVTLKD TWAKLEKKMG