Gene Dvul_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0398 
Symbol 
ID4663666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp509986 
End bp510537 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content64% 
IMG OID639818600 
ProductCheD, stimulates methylation of MCP proteins 
Protein accessionYP_965848 
Protein GI120601448 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1871] Chemotaxis protein; stimulates methylation of MCP proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.152516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCG AATTGATGGA CCTCGACCTC AGGCACCTGC ATCTTCGCAT CGGTGAGGGG 
ATTCTTGCCG CACGTCCGGC GCTCATCGCA ACGGTACTGG GGTCATGTGT CTCGGTGACG
TTCCATCATC CGTCGACGGA GACGGGTGGC ATCTTTCACG CCATGCTTCC CACCGTGCTT
GGTGCGGCAG ACGGTGCGCG CACTCCATGC AAGTACGTGG ACGCCGCCAT CGAAACACTG
CTGGGGCAAT TCGCCCGCCG GGGCATTGCC GCGAACGATC TCGTCGTGAA GCTCTTTGGC
GGGGCGTTCA CCATGAACCC CGAAGAGAAG CAGCGCCTGC GGTGCATCGT GGACGTGGGG
GGGCGCAACG TCGAGGTGGC GCGCGCCACG TTGCAACGCT TCGGCATCGA ACCGCAGTCG
GAGCATATTC TCGGCGACCG GGGGCGCAAG CTCTTCTTCC ATTCCGGCAC GGGCGAGGTC
TGGGTGCGAC TTTTGCGTCG GACGGAACCG CCTTCGCCGT CGGCACTGGT GTGCCGCGAT
GATTTGACGT AG
 
Protein sequence
MPAELMDLDL RHLHLRIGEG ILAARPALIA TVLGSCVSVT FHHPSTETGG IFHAMLPTVL 
GAADGARTPC KYVDAAIETL LGQFARRGIA ANDLVVKLFG GAFTMNPEEK QRLRCIVDVG
GRNVEVARAT LQRFGIEPQS EHILGDRGRK LFFHSGTGEV WVRLLRRTEP PSPSALVCRD
DLT