Gene Dvul_0368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_0368 
Symbol 
ID4664211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp474628 
End bp476352 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content66% 
IMG OID639818570 
Productradical SAM domain-containing protein 
Protein accessionYP_965818 
Protein GI120601418 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases
[COG1861] Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT CACGCAGTCT TCCACCCGTC ATCATACAGG CGACCAACAT CGCGCCGTTG 
CGCGGCAAAC ACCTGTTGCC ACTGGTGGAA GGCCGCACGG TCATCGAGGT GCTCATCGGC
AGACTGCGCG GCATCTGGCA CGACGACATC TGCGTGGCGA CCTCCGACCT GCCCGATGAC
GACGCCCTGT GCGCGCATGT GGCCGCACTG GGGGCGCAGG TGGTGCGCGG GCCGCACCGC
GACCTCGTGA AGCGGCTCAT CCTCGCGGCA GAGGCCATGC ACTGCGACCA TTTCGTGCGC
GTCATGGGTG CCGCCCCCTT CGTGTGCATC CCCCGTCTTG CCGACCTCGC AGCGGAACAC
GCCGAACGCG GCGTGGAGTT CAGCTACAAC GAACACCGCA TGGGCGTCCC GCGAGGCCTC
GGCGGGCAGG TGGTTTCTGT CGACATGCTG AAGCGACTCG ACGCCGCCGA CATCTCCGCC
GAAGTGCGTC AGGAATTCGC CTATTCCGTT CTCCAGAACG CGGAACATTT TGCCGTGCAC
CGGCAGGACA GCGACCTGCC CCGCCTCGCC CTCGACTTCC ACCTTGAGAC GACCAAGGAC
CTCTCCCTGC TGCGCGAAAT CGCCGTCAAC GTGCCCGATG TGACCATCGA GGCCATCATC
GACTATGCGG CGCAGCACCC CGCCCTGCAC ACCCTCTCGC GGGCCTTTCC GCCCAAGGAG
GTGGGGCTTG AGAAGCTGTT CCTCCACCCC GAGAAGATAC TGGCCCTCAC CAGCCAGAAC
GGCCTGCCCG ACGCCTCGTT CCCCGTCAGC GTGGAACTGT CGCTCACCAA CCGCTGTAAC
CTCGCCTGCG TGTGGTGCTC CGACAAGGAC CTGCGAGGAC GGCAGGGCGT GAAGGCCACC
CTGTCGCTCG ACACCGTGCG CCGTCTCACC CATGAACTGC GCGAGGGCGG CACCAAGGGC
ATCGTCATCG AGGGTGGCGG CGAACCGACG CTGCACCCCG ACTTCGCCGC CATCGTCGCG
TGCATCACCG ATGCGGGCAT GGGTGCGGGA CTCATCACCA ACGGCGTGGT GACCCTCCCG
CCCGACGTGC TGCGACGCCT CGACTGGGTG CGCGTGAGTC TCGACAGTTC GACCCGCGCC
GAGTTCCAGA ACGCCAAGGG GCGCGACGCC TTCGAGACCG TCATGGGCAA CATCGCCCAC
TTCGCCCGGC ACTGCCCCAC CGTGGGCATC GGCTACGTGG TGACGCGGCA CAACACCGAA
CACCTTGAGA GCCTCGTGCT GCGGGCGCGA CAGGCCAAGG CGAGCTACAT CCAGTTTCGC
CCCGTCATCG ACGCCCCCGA CATCGCCCCC GAAGACTTCA ACCTCGACTA CCTCAAACTC
TTCGAGACCG ACGGCTTCTG CGTCAACACC GACGCCATGC GCGACAATCA GGTACGGGGC
AACAGCAACC TGCCCTGCCG CGCGCATCCG CTCACCTCGG TCATCGGGGC CGACGGGTCG
GTGCACCTGT GCGGCAGGCT GAACATCTTC GACTGGTTCG AACCCATCGG CAACATCAAC
GAGCAGTCGT TCGGCGACAT CTGGCGTGGC GCGAAGCGCA AGAGTGCCGC AAAGGCCCTT
GCCGACCCCG GCTTCTGCGG GCAGTGGTGC CCCGAATGCC GCATCACCAA ATTCAACCAG
CTTCTGTGGC GTCTCTCGCA ATCACGAACC CGCAACTTCA TATAG
 
Protein sequence
MNASRSLPPV IIQATNIAPL RGKHLLPLVE GRTVIEVLIG RLRGIWHDDI CVATSDLPDD 
DALCAHVAAL GAQVVRGPHR DLVKRLILAA EAMHCDHFVR VMGAAPFVCI PRLADLAAEH
AERGVEFSYN EHRMGVPRGL GGQVVSVDML KRLDAADISA EVRQEFAYSV LQNAEHFAVH
RQDSDLPRLA LDFHLETTKD LSLLREIAVN VPDVTIEAII DYAAQHPALH TLSRAFPPKE
VGLEKLFLHP EKILALTSQN GLPDASFPVS VELSLTNRCN LACVWCSDKD LRGRQGVKAT
LSLDTVRRLT HELREGGTKG IVIEGGGEPT LHPDFAAIVA CITDAGMGAG LITNGVVTLP
PDVLRRLDWV RVSLDSSTRA EFQNAKGRDA FETVMGNIAH FARHCPTVGI GYVVTRHNTE
HLESLVLRAR QAKASYIQFR PVIDAPDIAP EDFNLDYLKL FETDGFCVNT DAMRDNQVRG
NSNLPCRAHP LTSVIGADGS VHLCGRLNIF DWFEPIGNIN EQSFGDIWRG AKRKSAAKAL
ADPGFCGQWC PECRITKFNQ LLWRLSQSRT RNFI