| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_0179 |
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| Symbol | |
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| ID | 4662435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 218125 |
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| End bp | 220221 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639818375 |
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| Product | ribonuclease II |
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| Protein accession | YP_965630 |
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| Protein GI | 120601230 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.35632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAC CTTCGGGCAT CGTGCGTTTT CCCGGCGCTG GCTGCGTCGT GGAGTTCATG
CAGGGCAACC GCCCCCAGAT AGCGTGGGTC ATGGAGGAAC AGGGCGGCCG CCTGCGCCTG
TTCCTGCCCA ACCGGCGCGA GACGAAGCTC GCCGCGGCGA GGCTTCTGCC ATGGGCAGGG
CCGCGTTACG ATGGCGAACG CTCGCGTGAC GACATGGTGG CGCTGCTCGA AGAGCACCGC
CAGCGGCGCG ACACCCGCGA AGCCGACATC CAGCCCCTCG AATTGTGGGA GATGGTACAG
GGCGAAGTGG AACAGGCGTC CGTGGAATGG TTCGCCGAAC TCCTGGGCGA GACTCCGGGC
GTCGACGAGG TGGCCGCCAT GGGCCGGGCA CTGCTCGGTT GCAAGACGCA CTTCAAGTTC
CACCCGCCGG ACTTCGAGGT CTACGACGCC GCCAAGGTCG AAGCGCGCAT GGTCGAGATG
GAGGCCGCGC GAGTGCGTGA AGCCCTCGTC GAAGCCGGAC AGGCCTTCAT CAAGGTGCTG
TGGGACGTGC ATTGCCGCCG CCGCACCATG CCGCTGCCCT CGTCTTCCGA GATGCCCCCC
GCCGAAGTGG CGGAACGTCT CGCCACGCTG CTGCGCACCC GCATGGCCGA CCCAGACGAC
CATGACAGCG ATTCGGTCTG GAAGCAGGTC ACCAAGGGCC TGCCCGACGA CGCGCACATG
CCGCTGCACC TTGCCGCCGC ATGGGGCATC GTGCCAGTCC ACCACAACTT CTGGATGGAC
AGGGCAGGCT ATGCCCCCGG CGACGAGTGG GCCATCGACC ACGTGGACGA AATCGACGCA
CTCATGAAGC GCGTCGAAGC GCTGCGCGAA CCACTCGTGG ACGGCACGTT CATCAGCATC
GACTCGTCCA CCACCCGCGA CATCGACGAC GCCTTCGACA TCTCGCCCTC TCCCGAGGGA
GGGTGGATAC TGCGCCTCGT GCTGGCGTCC CCCGTCACAG GGTGGGACTT CGACGGGCCG
CTGGACAGGG CCGTCCTGCG CCGTGCCACC AGCATCTACC TGCCCGAAAG GTCGCATCAC
ATGATGCCGG AGACGCTGGG GACAGACGCC TACAGCCTTC TCGCAGGTCA GGACAGACCC
GCACTGCTGG TCACCTTCGA CATCGCGGCC GACGGGTCAC TCCGTTCCAC CACCCCCGCC
ACCGGGTGGG TGCGCCTCGC CGCCAACCTC ACCTACACCG AATGTGAGGC CTGCCTCACC
GGAGAGGGCG ATGCAGGTCG CGCCGCCCCG CACGCCGACC GCCTCGCGCT GGCGGATGCG
CTGGCGAGAG TGCGGCAGCA GTTGCGCGTG GCTGCCGGTG CCGTGATCAT CGAACGCGAC
GACCCCAAGG TCACCCTCGA AGGCGAGGGC TGCGCCGTGA AGGTGCATGT GGCCCCGCCC
GACGAGACCC CGCGCGCGCA GCTTCTCGTC TCGGAGATGA TGATCCTTGC CAACGCCGCC
ATCGCCTCAT GGGGTGCGGA ACGTGGCATC ACTCTCCTCC ACCGCACGCA GGACGTGGGC
ATCCCGCGCG AATATGCCGG GGTATGGAAC CAGCCGCACG ACATCGCACG GGTGGTCAAG
GCACTGGCCC CTGCCCACCT CGAACCCGTT GCCAAGCCCC ACGCGGGTAT CGCCGTGCCC
GCCTACAGTC CCGTGACCTC GCCGTTGCGG CGCTACCCCG ACCTTGTCAA CGAGGCGCAG
GTCATCCATT ATCTGACCCA CGGCACCCCG CGCTGGTCGC GTGAAGAGGT GGAGGCCATG
CTGCCGCTTC TCGGTGCGCG TCTTGATGCC GCGGGGCAGG TGCAACGCTT CCGCCCCCGC
TACTGGAAGC TCTTCTACAT CCGGCAGCAG GGTGACAAGA CATGGCACGA GGCCGTGGTC
ACCGAAGAGA ACGACGCCTT CGTCACCATC AGCCTGCCTG AAGTGCAGAT TTTCGTGCGG
GGCAGACGGT CCACCTTCGG CGACAAGGTC TATCCGGGCC AGCATTTCAA TGTACGACTC
GGCAAGGTGC ATCCGCTCAA CAACGAGATT CAGATAGTGG ACGCCATGGA AGGCTAG
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| Protein sequence | MATPSGIVRF PGAGCVVEFM QGNRPQIAWV MEEQGGRLRL FLPNRRETKL AAARLLPWAG
PRYDGERSRD DMVALLEEHR QRRDTREADI QPLELWEMVQ GEVEQASVEW FAELLGETPG
VDEVAAMGRA LLGCKTHFKF HPPDFEVYDA AKVEARMVEM EAARVREALV EAGQAFIKVL
WDVHCRRRTM PLPSSSEMPP AEVAERLATL LRTRMADPDD HDSDSVWKQV TKGLPDDAHM
PLHLAAAWGI VPVHHNFWMD RAGYAPGDEW AIDHVDEIDA LMKRVEALRE PLVDGTFISI
DSSTTRDIDD AFDISPSPEG GWILRLVLAS PVTGWDFDGP LDRAVLRRAT SIYLPERSHH
MMPETLGTDA YSLLAGQDRP ALLVTFDIAA DGSLRSTTPA TGWVRLAANL TYTECEACLT
GEGDAGRAAP HADRLALADA LARVRQQLRV AAGAVIIERD DPKVTLEGEG CAVKVHVAPP
DETPRAQLLV SEMMILANAA IASWGAERGI TLLHRTQDVG IPREYAGVWN QPHDIARVVK
ALAPAHLEPV AKPHAGIAVP AYSPVTSPLR RYPDLVNEAQ VIHYLTHGTP RWSREEVEAM
LPLLGARLDA AGQVQRFRPR YWKLFYIRQQ GDKTWHEAVV TEENDAFVTI SLPEVQIFVR
GRRSTFGDKV YPGQHFNVRL GKVHPLNNEI QIVDAMEG
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