| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3194 |
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| Symbol | |
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| ID | 7175140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 4023362 |
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| End bp | 4027156 |
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| Gene Length | 3795 bp |
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| Protein Length | 1264 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643541730 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_002437598 |
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| Protein GI | 218888277 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.466435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG CTCCGCCTGT CGCCGAACTG CCGTTCCTGG CCATGCTGGG GGCACTGCTG
TTGCTCGGCG GCGCCGTGTC GGCCCTAGCG GCACGCCGAC GCCCCTTCAC CATGCTGGGC
CTGATGTGCC TTTCCGACAT CGGCCTCACG CTTCTCGGCC TTGGCCTTGG CGATGGCGCC
GGGCTGGTCG GGGGAACCAC CCAATTCATC TACCAGTTCG CGGCGCGGTG TCTTGCGCTG
CTCACCCTTG TCCGTCTTGC CCGCACGGCG GGGTCGGACC GACTGGACGA CATGCGCGGC
ATCCGCGCGG CGCTGCCCCT GACGGGGCTG TTCTTCGGGT TCGCCATGTT TGCGGGCATG
GGGCTTTCCG TCTTCCTCGT GCCGGACGGG CGGGCCTTCA TCCTGCATGC CGCCTTTGCC
GCCGGGCACT GGGGCTACGC CGTGGCCGTG GCCTTCGCGG GCATGGCCCT GGCCGCCGCC
ACAGTGCTGT CGGTACAGGC CATCTGTCTT GAATCCGGCC AGTGGCGCGA ATCCGCCCAC
GTCCCCCACG CCCCGTCCGT CACGTTCCAC GTGCTGGCGG GGCTTTTTGC GGCCTTCCTT
GCCGCGTTCG GCCTGGCCGG GCACGCCGCC ACCGCACAGG TGGCCGACGC ATTGGGCATT
GCGCGCGACA CCCTGCCCGT CTTCGGCGCG CACTGGCACC CCGCCGCCCT CGTGCCCTAC
GCGGGCGCGT TTGCCGTGTG GTGCATCGGC CTTGCTTCCG GTCGCGCCCG CGCCCTGGCC
GGCGTGGTGC TGGTGGCCGC CTCGGTGGCG CTGACCTGGA CCGACACCAC CATCGACCCG
CTGTCCCGCC TGTTCGGCGT GATCATCGCG GGCATCGGCC TGGTGGTGGC GGTGTACTCG
ACCGGCTACA TCCACCACGA CCGCCGCGCG GGCGGCTACT GGTTCTTCCT GCTGCTGATG
TGCGGTTCGC TCTCGGGCCT GGCCCTTGCG CGCGACTTCG GCGGCTTCTA CGTGTTCTGG
GAACTGATGA CTTTCTCGTC GTACTTCCTG GTGGCCCACG AGGCCACGGA CAAGGCGTTC
CACGCCGCCG TGAAGTACTT CGTGATGTGC GTGGCCGGGG CCTGCGCCAT GCTGCCCGGC
TTCATGCTGC TGTCCGCCCA GGCGGGCACC CTGGACTTCG CGGCCCTTGC CGGTCTTGCC
GCCACCCTGC CCGCCCCCGT GGTGAAGGGC GCGGTGGTGC TGGCCTTCGT GGGCTTTGCG
GTCAAGGCGG GCCTTGTGCC CGGCCACGGC TGGCTGCCCG ACGCGCACCC CGCCGCCCCT
TCGTCCATTT CCGGCCCGCT GTCGGGCATC CTGACCAAGA CCGGCGTGTA CGGCACCGTG
CGGCTGATGC TGGCGGTGTT CGGCTCCGCC GTGCTGCTGA AGGCCGGGGA ATCCGCCGGT
GGCTTCAGCT CCATGGGCCT GCTTGTCACC GCGCTGGGCA CGGCCACCAT GCTCTACGGC
GAACTGATGG CCCTGAAGCA GGACGACCTG AAGCGCCTGC TGGCCTACTC GACCATGGGT
CAGGTGGGGG AAATCTTCAT GGTCATCGGC CTCGGCACCT GGCTGGCCAC CACCGGCTCG
CTGCTGCACG TGCTGAACCA TGCCATCATG AAGAACCTGC TGTTCCTCTG CGCGGGCGGC
CTCATCCTGC GCGCGGGCAG CAAGAAGCTG GCGGACCTTG CGGGCATGGC CCGGGTCATG
CCCTTCACCG CCGGGTGCAT GGTCGTGGGC CTCATCTCCA TCATGGGCCT GCCGCCGTTC
AACGGCTTTG TCGGCAAGTA CCTGATGCTG CAAGCCCTTG TGGCCGCCGG GCACCCCGCC
GTGGCCGCCG TGCTGCTGCT GGGCAGCCTT GCCGGGTGTG TCTACTACAT GCGCATCGTG
CGCACGCTGG TCTTCCAGCC CTACACCGGC CCCATGGTGC AGGAGGCCCC GGTCTCCATG
CGCGTGGCCA CCGGCGTGCT GGCCGCGCTG TGCCTGGTGC TGGGCGTGCT GCCGCAGCTG
GGCCTGTCGC TGGTCACCCC CGTGGCCGAC ATGCTGGCGG GCGCGGGCAA GCTGGACGCC
CAGGCCCTGC CCATGCTGGC GGTGACCTGG CACCCCTTCG TGCTCGTTCC CATGCTGGGC
GCCGTGGTGC CCTTCCTGCT GCGGCGCGAC CGCAAGGCGG CGGGCCTGTC CACCGCCATC
ACCCTGGCCG TTGCGGCCAT CGCGGTGGTG GTGTTCGGGC GCGGGCTGGA TTCCATCTCC
TTCGCCTTCG CGCTCGTGGT GCCGGTCATC GGCTGCCTGA ACATGTTCTA CGCCGTGGGC
TACATGGAGC ACAGCCACAC CCAGTGGCGC TTCTACACGT TCTTCCTGTT CATGGTGGGC
GGGCTGATGG GCGTTGCCGC CAGCAACGAC CTGTTCGGCT TCTTCACCTT CTGGGAGATC
ATGAGCTCAT GGAGCCTGTA CTTCGTCATC GTGCATGAGG AAAACCCCGC CGCGCTGCGC
GAGGGCTTCA AGTACTTCTT CTTCAACGTG CTGGGCGCGG CCTTCCTGTT CCTGGGGGTG
GTCATGCTGT CCTCCATGGC GGGCGACCCC AGCTTCGGCG CGGTGCGTTC CGCCCTGCCG
ACCATGCCGG TGGCCCTGGC CGCCACCGCC GTGGCCCTGA TGGCCATCGG CTTCACCATG
AAGGCGGCGC AGCTGCCCTT CCGCATCGAC GTGCAGATGC ACCCGGCAAC GGCCCCCACG
CCGGTTTCCG GCTACATCTC GTCGGTGCTG CTGAAGAGCG CCCTGTTCGG ACTCGCCAAG
CTGTTCTTCG TGCTGGGCGG CGCGGGCTTC TTCACCGGTC TGGCCTCCCA GTGGGGCCAG
CCGCAGGTGA TGTACGCCAT CGCCTGGGTG GGCGGCATCA CCATCGTCAT GGCCGCCCTG
CTGGCGGTGA TGCAGTCGGA CCTCAAGCTG GTGCTCATCT ACTCCACCGT CAGCCAGCTG
GGCTACATGG TGGTGGGCGT GGCGCTGGGC ACCCCGCTGG GCATGGCCGG CGGCATGCTG
CACCTGGTCA ACCACGTGCT GTTCAAGGAC CTGCTGTTCC TGGTGGCCGG TTCGCTCATC
CTGTGCACCC ACAAGCACTC GCTGGACGAA CTGGGCGGCA TCGGGCAGCG CATGCCCGTC
ACCCTGACCA TGTTCGCCAT CGGGGCGCTT TCGGTGGTCG GCGTGCCGCC CACCAACGGC
TTTGCCTCCA AGTGGATCCT CTACCACGCG CTGATGGCCG AGGGCGAAGT GGCGCTGGCC
CTGCTCTCGC TGGCGGGCAG CGTGCTGACC CTGGCCTACT TCGCCAAGTT CCTGCACTCG
GCCTTCCTGG GCCGCCCCTC GCCGGAACTG GCCCACGTGC ATGAAGCCCC GCGCATCATG
CTGGTGCCCA TGGGCATCCT GGCCGCCGGG TGCATCATCA CCGGCGTGTT CCCGGGCCTG
CCCCTGCTGG CCATCGACAT GATGGGCCGC GAACTGGGCT TTGCCGGGCT GATGGTGGCG
CCGTGGGGCG TGGCTTCCGG CGCGGGGGCG TTCAACGCCA CCGCCCTGGC CGTGCTGCTG
GCGGTTGCCT TCTTCGGCGG GCGGACCGCC CTGCGCGGGC TCATCGGCAC CGTGCGCACC
ACCGACATCC ACACCTGCGG CGTGGCCATG AAGGCCGACG AGGCCCGCCT TGCCCCGCAG
GACATCTACG GCGCACCCCT GGCCCTGCTG CGGCAGCTGG CCCAGGCGGC CATGCCCGCC
CTGAAGCGGA GGTAG
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| Protein sequence | MTTAPPVAEL PFLAMLGALL LLGGAVSALA ARRRPFTMLG LMCLSDIGLT LLGLGLGDGA
GLVGGTTQFI YQFAARCLAL LTLVRLARTA GSDRLDDMRG IRAALPLTGL FFGFAMFAGM
GLSVFLVPDG RAFILHAAFA AGHWGYAVAV AFAGMALAAA TVLSVQAICL ESGQWRESAH
VPHAPSVTFH VLAGLFAAFL AAFGLAGHAA TAQVADALGI ARDTLPVFGA HWHPAALVPY
AGAFAVWCIG LASGRARALA GVVLVAASVA LTWTDTTIDP LSRLFGVIIA GIGLVVAVYS
TGYIHHDRRA GGYWFFLLLM CGSLSGLALA RDFGGFYVFW ELMTFSSYFL VAHEATDKAF
HAAVKYFVMC VAGACAMLPG FMLLSAQAGT LDFAALAGLA ATLPAPVVKG AVVLAFVGFA
VKAGLVPGHG WLPDAHPAAP SSISGPLSGI LTKTGVYGTV RLMLAVFGSA VLLKAGESAG
GFSSMGLLVT ALGTATMLYG ELMALKQDDL KRLLAYSTMG QVGEIFMVIG LGTWLATTGS
LLHVLNHAIM KNLLFLCAGG LILRAGSKKL ADLAGMARVM PFTAGCMVVG LISIMGLPPF
NGFVGKYLML QALVAAGHPA VAAVLLLGSL AGCVYYMRIV RTLVFQPYTG PMVQEAPVSM
RVATGVLAAL CLVLGVLPQL GLSLVTPVAD MLAGAGKLDA QALPMLAVTW HPFVLVPMLG
AVVPFLLRRD RKAAGLSTAI TLAVAAIAVV VFGRGLDSIS FAFALVVPVI GCLNMFYAVG
YMEHSHTQWR FYTFFLFMVG GLMGVAASND LFGFFTFWEI MSSWSLYFVI VHEENPAALR
EGFKYFFFNV LGAAFLFLGV VMLSSMAGDP SFGAVRSALP TMPVALAATA VALMAIGFTM
KAAQLPFRID VQMHPATAPT PVSGYISSVL LKSALFGLAK LFFVLGGAGF FTGLASQWGQ
PQVMYAIAWV GGITIVMAAL LAVMQSDLKL VLIYSTVSQL GYMVVGVALG TPLGMAGGML
HLVNHVLFKD LLFLVAGSLI LCTHKHSLDE LGGIGQRMPV TLTMFAIGAL SVVGVPPTNG
FASKWILYHA LMAEGEVALA LLSLAGSVLT LAYFAKFLHS AFLGRPSPEL AHVHEAPRIM
LVPMGILAAG CIITGVFPGL PLLAIDMMGR ELGFAGLMVA PWGVASGAGA FNATALAVLL
AVAFFGGRTA LRGLIGTVRT TDIHTCGVAM KADEARLAPQ DIYGAPLALL RQLAQAAMPA
LKRR
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