| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_3111 |
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| Symbol | |
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| ID | 7175057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3923820 |
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| End bp | 3925289 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643541647 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002437515 |
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| Protein GI | 218888194 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.00116438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTGTCGA AAATGAAGAC TGCCGCAACC GGACGCTGGA GCGCGCCGGG CGGGTACCGC
GAGGTGCTCG GCGTCAGTCT GCCGCTGGTG GCGGGCATGG CCTCCACCAC GGTCATGGAG
TTCACCGACC GGTTGTTCCT GAGCCACTAT TCGGTGGAGG CCATCGCGGC GGCCACACCG
GCTGCGGTGG TGCATCTGCT GTTTCTGCTC ACCTGCATGG GCATTACGGG CTATGCCGGG
GTGTTCATCG CCCAGTACAT CGGTTCCGGC GCGCCGCACC GGGTGGGGGT GGCGCTGTGG
CAGGGGCTGC TGATGGCCTT CTTTTTCGGT GGGTGTCTTG CCCTGCTGTG GTTCGCGGCG
CCCGCCATCT TCGCCTTTGC CGGGCATCTG CCCGCCGTGC AGGCGGGGGA GGTGGCCTAC
TTCCGCATGC TGGCTCTGGG GTCGGTGCTG GCGCTGGGCA ACAGCTGCCT TGGCGGCTTC
TTTTCCGGGC AGGGGCGCAC CCGGCCCGTG ATGCTGGCCA ACTTCGCGGC CATGGCCGTG
CACATTCCGC TCGACTACGC GCTGATCTAC GGTGCGTGGG GGCTGCCCGA AATGGGCATA
GCAGGTGCGG GGCTGTCCAT GATCCTCAGT TGGGCCGTCA CTTCGCTGCT GCTGGGGGGC
ATGGTGTTCA CCCGGCGCAA CGAGCGGTGC TTCCGGGTCT GGAGCGGACG CGGCTTCGAG
CGGGCGCTGT TCCTGCGCAT GGCCCGCTAC GGCCTGCCCA GCGGCATCAA CGGCTTTGCC
GAACTGTTTT CGGTGACGTG GTTCGTGTTC CTGGTGGGCG AACTGGGCGA AACGGCCCTG
GCCGCCACCA ACATCACCTT TTCCATCAAC ATGGTGGCCT TTCTGCCCAT GATGGGCATG
AACATCGCCG TGGGCAGCAT GGTGGGGCAG GCCATGGGCA AGGGCAGCCC CGTCGCCGCC
GAGCGGGTGA CCTCCAGTAC CCTGCACGTG GCCATGGCCT GGATGCTGCT GCTTTCGCTG
TTCTTCTTCT GCACGCCGGG GCCGCTGTAC GACCTGTTCC TGAGCGGCGG CGCGCAGGAT
CCCGCCGTGC TGGCCCAGAA GGCGGAAATC CGCGCCATGG GCGTGGTGCT GCTGCGCTTC
GTGGCGGTGT ACTGCCTGCT GGACGCCGTG ACCATCGTGT ACACCGGCGC GCTGAAGGGC
GCGGGCGACA CCTGGTTCGT CATGTGGAAC GTGCTGCTGG GCTGCGTGGT CTGGCTGGTG
CTGCCCACGC TGGCCCTGCG CGCCTCGGGC CTGATGACCC TGAACACGCT GTGGGCGGCC
TTCACCGCGT TCATCCTGTT GTTGGCCGTG GTGTCGTGGC TGCGTTTTCG GCGCGGTGCG
TGGAAGCGGC TGCGGCTGGT GGAGACGGCG CACCCACTGC CCGATGTGCC CGATGGGTCT
GTCGGCCCCG AAGACGGCGG AAAGGCCTGA
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| Protein sequence | MLSKMKTAAT GRWSAPGGYR EVLGVSLPLV AGMASTTVME FTDRLFLSHY SVEAIAAATP
AAVVHLLFLL TCMGITGYAG VFIAQYIGSG APHRVGVALW QGLLMAFFFG GCLALLWFAA
PAIFAFAGHL PAVQAGEVAY FRMLALGSVL ALGNSCLGGF FSGQGRTRPV MLANFAAMAV
HIPLDYALIY GAWGLPEMGI AGAGLSMILS WAVTSLLLGG MVFTRRNERC FRVWSGRGFE
RALFLRMARY GLPSGINGFA ELFSVTWFVF LVGELGETAL AATNITFSIN MVAFLPMMGM
NIAVGSMVGQ AMGKGSPVAA ERVTSSTLHV AMAWMLLLSL FFFCTPGPLY DLFLSGGAQD
PAVLAQKAEI RAMGVVLLRF VAVYCLLDAV TIVYTGALKG AGDTWFVMWN VLLGCVVWLV
LPTLALRASG LMTLNTLWAA FTAFILLLAV VSWLRFRRGA WKRLRLVETA HPLPDVPDGS
VGPEDGGKA
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