Gene DvMF_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_3086 
Symbol 
ID7175032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3898594 
End bp3899271 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID643541623 
ProductDNA repair protein RadC 
Protein accessionYP_002437491 
Protein GI218888170 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value0.599972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTG GTCCCCACTA CCATGGGCAC CGCGAACGGG TGCGGGCCAG ACTGCGCAAC 
GACCCCGCCG CCCTGCCCGA CTACGAGGTG CTGGAACTGC TGCTGGGCCA CGTGCTGCTG 
CGCCGCGATA CCAAGCCGCT GGCCAAGGAA TTGCTGTCCC GCTTCGGCAG CCTGCGCGGC 
GTGCTGGACG CGCGCCCCTC GGAGCTGATG GGGGTAAAGG GTTTCGGCCC GGCCATGCTG 
GATTTCTGGG CCCTCCTGCG CGAGGTGATG GCCCGCTACG TGGAAACTCC GGCCCGCGAA 
CGCGAGGTGC TGGGCAGCCC GCAGGCGGTG GCGGAAATGG CCCGCATGCG CCTGGCCGCC 
TCGCCCCACG AAGAGGTGTG GGTGGCCCTG CTGGACACCC AGAACCGCCT GGTGGCGTGG 
GAACGGGCCT CGCGCGGCAC GGTGAACGCA TCGGTCGTGT ACCCGCGCGA AATCCTGGAA 
CTGGCCCTGC GGCACAAGGC GGCATCGATC ATCCTGGTGC ACAACCACCC CGGCGGCAAT 
CCGTCGCCGT CGGCGGGAGA CATCGAGATC ACCCGGCAAC TGGAACTTTC GGCCAAGGCC 
ATCGGCATGC GTCTGCTGGA TCACGTCATC GTCACCGACG ACGCCTGCTA CAGCCTGAAG 
GACGACGGCC TTATCTGA
 
Protein sequence
MTTGPHYHGH RERVRARLRN DPAALPDYEV LELLLGHVLL RRDTKPLAKE LLSRFGSLRG 
VLDARPSELM GVKGFGPAML DFWALLREVM ARYVETPARE REVLGSPQAV AEMARMRLAA 
SPHEEVWVAL LDTQNRLVAW ERASRGTVNA SVVYPREILE LALRHKAASI ILVHNHPGGN 
PSPSAGDIEI TRQLELSAKA IGMRLLDHVI VTDDACYSLK DDGLI