Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2956 |
Symbol | |
ID | 7174898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3728452 |
End bp | 3729744 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643541489 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002437361 |
Protein GI | 218888040 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 0.232515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA AGATCATCAT CGGCCTCGCC ATCGCCCTCG CCGTGGCCCT GATTGCCGCC TACTTCCTCT CGCGGCGCGA AGGCCGCACC GAAATCACCC AGACCGCCAC CGTCAGCCGG GCCACCGTGC GCAAGGTGCT GGACGCCACG GGCATCATCA AGCCCGAGGT GGGCGCCATC GTGAAGACCG GCACCCGGTT CACCGGCATC ATCCGCACCA TGCACGTCAA GGTGGGCGAC GCGGTGAAGG CCGGGCAGAT CATCGCCGAA ATCGACGACC GCGAGCAGCG CGCCCAGCAG GACCAGGCCG AGGCCACCCT GCGCAAGGCC CAGTCCGAGC TTGCCCGCGT GGAGGCCTCG TACCCCCTGC AAATCCGCGA GGCGGAAGCC CAGATGGCCG CCGCGCAGGC CGACTACGAC TACGCCGCCC TGAACCTGAA ACGCCGCCGC ACCTTGGTGG AGCAGGATCT GGACGCCCGC AACACCCTGG ACGAGGCGAA GCAGCAATCG GAAACCACCG GCAACACCCT GGCCGCGCGC AAGGCCACCC TGGACCGCCT GCAACGCGAA TCGACGCTGG CCATCAAGAC CGCGCGCGAA GCCGTGAAGG AAGCGCAATC CGCGCTGGAG GCCACCAACG TGCGCCTGTC CTATTCGGTT ATCCGCGCCC CGCTGGACGG CGTGGTCAGC GAGGTCACGG CGCAGGGCGG CGAAACCGTG GTGGCGGGCT TTCAGGTGGC CAACCTGATC ACCGTGCTGG ACCCCACCCG GCTGGAGATG TGGATCTACG TGGATGAAAC CGACGTGGGC CAGATAACCC CCGGCATGAC CGTGGAATTC CGCGTGGATT CGCTGCCCGG CCGCACCTTT GGCGGCACGG TGAACCAGAT CTACCCGCAG CCGGAAATCC GCGACAACAT CGTGTACTAC CGGGCGCTGG TGCGCCTTAC CCCGCAGACC TCCACCGACC TTCGGCCCGA AATGACCACC CAGTGTCGCA TCGTGGTGCA GCAGAAGGAC AACGTGCTGG CCGTGCCCAA CGAGGCCCTG AAATGGGTGG GCGGCGAACA GGTGGTGTTC GTGCAGGGTG ATGGCGCCAT CCGCAGGGTG CGGCCCCGCA TCGGCCTGGC CGGTGCCGAG ACCAGCGAGG TGCTGGAAGG GCTGGCCGAG GGCGACGTGG TGGGCACCAA GGTGGTGCTG CCCACTTCGC GCGGCGGCGG GCGCCCCGAA CAGACGCCGG GCGGTTCCGG CGGCCCGGGC GGCGGCCCCG GCTCCGGGCG ACCGGGCAGG TAG
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Protein sequence | MRKKIIIGLA IALAVALIAA YFLSRREGRT EITQTATVSR ATVRKVLDAT GIIKPEVGAI VKTGTRFTGI IRTMHVKVGD AVKAGQIIAE IDDREQRAQQ DQAEATLRKA QSELARVEAS YPLQIREAEA QMAAAQADYD YAALNLKRRR TLVEQDLDAR NTLDEAKQQS ETTGNTLAAR KATLDRLQRE STLAIKTARE AVKEAQSALE ATNVRLSYSV IRAPLDGVVS EVTAQGGETV VAGFQVANLI TVLDPTRLEM WIYVDETDVG QITPGMTVEF RVDSLPGRTF GGTVNQIYPQ PEIRDNIVYY RALVRLTPQT STDLRPEMTT QCRIVVQQKD NVLAVPNEAL KWVGGEQVVF VQGDGAIRRV RPRIGLAGAE TSEVLEGLAE GDVVGTKVVL PTSRGGGRPE QTPGGSGGPG GGPGSGRPGR
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