Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2927 |
Symbol | garR |
ID | 7174869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3698129 |
End bp | 3699028 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643541460 |
Product | tartronate semialdehyde reductase |
Protein accession | YP_002437332 |
Protein GI | 218888011 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 0.378474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGCA TCGGATTCAT TGGGCTCGGC ATCATGGGCG CCCCCATGTG CCGCAACCTG CTCAAGGCCG GGTTTCCGGT AACCGCCTAC ACCCGCAACG GCGACAAGCT GCGGGCCATG GCCGCCGAGG GCGCGGCGGC GGCGGAAAGC CCCGCTGCCG TGGCCGCCGC GTCGGACGTG GTCATCACCA TGCTGCCCAA CTCGCCCGAG GTGCGCGCGG TGGCCCTTGG CCCCGGCGGC ATCGCGGAAG GCGCGGCCCC CGGCTGCATC GTGGCCGACA TGAGCTCCAT CGCCCCGCTG GCCAGCCGCG AGATCGCGGC GGAACTGGCG AAGAAATCCA TCCGCATGCT GGACGCCCCG GTGAGCGGCG GCGAGCCGAA AGCCATCGAC GGCACCCTGT CGGTGATGGT GGGCGGTGCG CAGGAAGACT TCGACGCCTG CCTGCCGGTA TTCAAGGCCA TGGCCGCCTC GGTGGTGCGC GTGGGCGAGG TGGGCGCGGG CAACGTGACC AAGCTGGCCA ACCAGATCGT GGTGGCGGGC AACATTGCCG CCATGTCCGA GGCGCTGGTG CTGGCCACCC GCGCCGGGGC GGACCCGGAC CTGGTCTACC AGGCCATCCG GGGCGGCCTT GCGGGCAGCA CCGTGCTGGA TGCCAAGGCC CCGCTGGTCA TGGACGGCAG GTTCACCCCC GGCTTCCGCA TCAGGCTGCA TGCCAAGGAC ATGGGCAACG TGCTGGAAAC CTCGCGCGAG TTGCACGTGC CCCTGCCGCT GGCCGCCCAG TTGATGGAAG TGATGCAGGG CCTGATGGCC GACGGGCTGG GCGATGCCGA CCACGGCGCG CTGATCCGCC ACTGGGAGAA GCTGGCCGGG GTGGAGGTGC GCCGCAACAA GCCTTCCTAG
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Protein sequence | MQRIGFIGLG IMGAPMCRNL LKAGFPVTAY TRNGDKLRAM AAEGAAAAES PAAVAAASDV VITMLPNSPE VRAVALGPGG IAEGAAPGCI VADMSSIAPL ASREIAAELA KKSIRMLDAP VSGGEPKAID GTLSVMVGGA QEDFDACLPV FKAMAASVVR VGEVGAGNVT KLANQIVVAG NIAAMSEALV LATRAGADPD LVYQAIRGGL AGSTVLDAKA PLVMDGRFTP GFRIRLHAKD MGNVLETSRE LHVPLPLAAQ LMEVMQGLMA DGLGDADHGA LIRHWEKLAG VEVRRNKPS
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