Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2905 |
Symbol | |
ID | 7174847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3670950 |
End bp | 3673319 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643541438 |
Product | surface antigen (D15) |
Protein accession | YP_002437310 |
Protein GI | 218887989 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.0651948 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTGCA TCCGCCTTCA TGCCGCCGTG GCGCGGTCCT TCTCCCATGC TCCGCCGCTG CCGGGCCGGA GGCTGGCACT GGCGCTGCTC ACCACGCTGT TCCTGACGTT GACGGGCTGC GCCGCACCGC GCAACGACGT GCCCTCCGCA CCCGGAACGT CTGCCCCCAC AGCCGTTCGC AACGCCGACC CCAGCGCCCT CGAGGCCACC CGCGCGCTTG ACGCCGTGGC CCCGCCGCGC ACCCCGCCCG GACTGTGCCC CCCCGCCATG GCAGACGCCA CGGCTGCGCC CCGCCCCCGG AAAGCTGCGC CGGGCACGGC ACCCGGCCAA CCGCCGAGCC AGCCTTCGGA AAACGTGGCC TACCGGGTCT CCTTCATCAT CGCGCCGACG GGCAGTGCTT CCGACGGCAG TGGCCCCCAT GGCGATCCCC CCCATGGCGT CCTCCCCCAT GAGAGCCTTC CTGACACGCC CCCGGCATCC CGGCCCGATC CCGGCGCGGA CGATCGGGAG CTGCTGGACG CGACGCGCAA CGCCAGCCTG CTGCAACGCC TTGCCGACAC CCCTCCCGAA AGCATGACCG GCCTGCGACG CCGCATGCTG GCCGACGAGC AGGAAGCGGT GAAGGTGCTG CGCGCCCACG GGTACTACGC GGGCACGGCG GCGGGCAGCA TCGACGACGG CGCATCGCCC GTGGCCGTCA GGCTGGAACT GCGGCCCGGC CCGCGCTACG TGGTGGGCGC GACGCACATT CGCATCGTGG ACGGCGTGTC TTCCCTCGCC ACGGAATTTG CACCCGCGCC GCCGCGCACC CTGGCCGAGG TGGGCCTTGC CTCCGGCGCG CCCGCCATAT CCGACGCCGT TCTGGATGCC GTGGGGCGCG TGCCGGTCGC CCTGCGCGAC ACGGGCTACC CCTTCGCGCG GGTGGCATCC GCCCGGTACG AGGTGGACCA TGCCGCGCGC ACCCTGGACG CCACCGTGGA CGTGGTGGCG GGGCTGCCCA CCCGCATGGG GCCACCGCAA ATCAACGGCG CCCGCACGGT GCGCCCCGAA TGGCTGGAAT CCATGGCGGA CTGGCAGGCG GGCCAGCCGT GGGACGAACG GACGGTAGAG CGCTACCGTG AACGGCTGCG CGCCACCGGG CTGTTCAGTG CGGTCAGCGC CGGGGCCGTG CCCGCGCCGG AATCCGCCAC GGCTACGGAC GCCCACGCCG CGTCCGACAC CGCGCCCGAC ACCGGGACGG CCCTGCCGCC CGGCACCCGC CCCGACGCCG CCTACACCAG CCCGGTGCGG GTGGAGGTGA CCGAAGGCCC GCAACGCACC GTGGGCGGCG GCCTGCGCTA CGATTCCACC CTGGGCCCCG GCGTGCTGGC CTTCTGGGAA CACCGCAACC TGCTGGGCGA AGGAGAACGG CTGCGGCTGG AACTGCCGGT CTGGGACAAG CGGCAAGAGG GCAAGGCCAG CTTCCGCAAG CCGTCCTTCC TGCGGCCCGA CCAGGAACTG CTGGCCGAAA GCTGGGTGCG CAACGAAACG TCCGACGCCT ACGACCAGCA GGCCGCCTTT GCCTCCGTTG GTCTGGCGCG CGACCTGGCC CCCGGCTGGC GGGCCGGGGT CGGCGTGTCC ACCGAGGGTG GCCGCATAGA GGACGCGGGC GGTCCGGAGC GCTCGTACAC CATGTGGGGG CTGCCGCTTT CGCTGCGCCG CGACGCCACC GACGACCTGC TGGACCCGAC GCGCGGCACA CGGGCCGACC TTTCCGTCAC CCCCTACACC GGGGTCTACG ACGAACCGTT CAACGTGGTG CGTTCGCGGC TGGATGTCAG CGCCTATCAT GTCTTGCTGC GCGGCAAGGC ACACCGAGCG GGGCAGGCCG ACAGGACCGA CAGGGGCGAC AACGGGCCCG ACGGTCACCC GGACGGTCTC GCGGGCGGCT ACCCGGACGG TCCCGACGGA CGGCTGGTGC TGGCCGCCAG CGCGGCTGCC GGGTCGCTGT CCGGGGCGTC CAGCGGCGCG GTGCCCGGCT CCATCCGCTT TTACGGCGGC GGGGGCGGTT CTGTACGCGG CTATTCCTAC CAGTCCCTGG GCCCGCGCGA GGACGGCGAC CCCATCGGCG GCTCCTCGTT CGGCGAGGCC AGCTTCGAAC TGCGCTACCG CATTTCCGAA ACCCTGGGCA TCGTGCCCTT TCTGGACGGC GGCAACGTCT ACGAAGAAGA AACACCCCGC TTCGGCGACG CCATGCGCTG GGGCGCGGGC ATCGGCGTGC GCTACTACAC CGTGGCAGGC CCGCTGCGCT TCGACGTGGC CACCCCGCTG AACCCGCGCG AGGACGACGC CCCCCTGCAA TTCTACATCA GCATCGGGCA GAGCTTCTGA
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Protein sequence | MPCIRLHAAV ARSFSHAPPL PGRRLALALL TTLFLTLTGC AAPRNDVPSA PGTSAPTAVR NADPSALEAT RALDAVAPPR TPPGLCPPAM ADATAAPRPR KAAPGTAPGQ PPSQPSENVA YRVSFIIAPT GSASDGSGPH GDPPHGVLPH ESLPDTPPAS RPDPGADDRE LLDATRNASL LQRLADTPPE SMTGLRRRML ADEQEAVKVL RAHGYYAGTA AGSIDDGASP VAVRLELRPG PRYVVGATHI RIVDGVSSLA TEFAPAPPRT LAEVGLASGA PAISDAVLDA VGRVPVALRD TGYPFARVAS ARYEVDHAAR TLDATVDVVA GLPTRMGPPQ INGARTVRPE WLESMADWQA GQPWDERTVE RYRERLRATG LFSAVSAGAV PAPESATATD AHAASDTAPD TGTALPPGTR PDAAYTSPVR VEVTEGPQRT VGGGLRYDST LGPGVLAFWE HRNLLGEGER LRLELPVWDK RQEGKASFRK PSFLRPDQEL LAESWVRNET SDAYDQQAAF ASVGLARDLA PGWRAGVGVS TEGGRIEDAG GPERSYTMWG LPLSLRRDAT DDLLDPTRGT RADLSVTPYT GVYDEPFNVV RSRLDVSAYH VLLRGKAHRA GQADRTDRGD NGPDGHPDGL AGGYPDGPDG RLVLAASAAA GSLSGASSGA VPGSIRFYGG GGGSVRGYSY QSLGPREDGD PIGGSSFGEA SFELRYRISE TLGIVPFLDG GNVYEEETPR FGDAMRWGAG IGVRYYTVAG PLRFDVATPL NPREDDAPLQ FYISIGQSF
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