| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2510 |
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| Symbol | |
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| ID | 7174446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3165245 |
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| End bp | 3166171 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643541040 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002436917 |
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| Protein GI | 218887596 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCC TGCCAGCACA GCAGCATGGC CTTCTGGTGC TGAACAAGCC CCAGGGCCCC
ACCTCGGCCC AGTGCATCGC CAGGGTGAAG CGGCTTGGCC AGAAAAAGAT CGGGCACGCG
GGCACCCTCG ACCCCATGGC GAGGGGGGTG CTCCTTGTGC TGTTGGGGCA TGCCACAAAG
ATTTCCGGCC ACCTGATGGC CGACGGCGAA AAGGTGTATC TTGGCACCCT TCGCCTTGGC
ACCACCACCG ATACGTGGGA CGCGGAAGGC AGCGTGACGG CCACCGCCCC GTACGACCAC
GTGACCCCGG ACGACATCCG GCGCGAGGTG GAAAACTGGC TGGGCAGCAC CGAACAAGAG
GTGCCGCCCT ACTCCGCCGC CAAGCACCAG GGGCAGCCCC TCTACAAGCT GTCCCGGGCC
GGGCGCGAGA CGCCGGTAAA GACGAAGACC GTCGAAATTT CGCGGGCACA GGTCGTATCG
TGCGACCTGC CGTCCGCGAC CTTCCGGGTA ACGTGCAGTT CCGGTACCTA CATACGGTCC
CTGGCCCACA GCTTGGGGAT GCGTTTAGGG TGCGGCGCCA TGCTTACGGA ACTGACCCGG
GAGTACAGTC ACCCGTTCGG TATTGACGAG GCGCACGAGC TAGATGCCGT GCTGGCCGAG
CCCGAGCGGT TGCCGGAGCG GGTCATACCC GTCACGCGAG CCCTGCCCCA CTGGCCCAAG
CTGCGCATCA GCGCGGCGCA GGAGGCGGGG GTGCGCAACG GAATGATCGT GCCGTACCTT
CCCGAAGCCA TGGCGGAACT GCCATTCGCA GAGGGATTGA AGGCCATCAT GCTCGCTCCG
GACGACACGC CCGTGGCCCT GGCCGAGACG CGCATCGTGA ACGCGCAGCC GGTCTGGACC
GTGCTTCGGG GACTGTGGAG CCAATAA
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| Protein sequence | MAVLPAQQHG LLVLNKPQGP TSAQCIARVK RLGQKKIGHA GTLDPMARGV LLVLLGHATK
ISGHLMADGE KVYLGTLRLG TTTDTWDAEG SVTATAPYDH VTPDDIRREV ENWLGSTEQE
VPPYSAAKHQ GQPLYKLSRA GRETPVKTKT VEISRAQVVS CDLPSATFRV TCSSGTYIRS
LAHSLGMRLG CGAMLTELTR EYSHPFGIDE AHELDAVLAE PERLPERVIP VTRALPHWPK
LRISAAQEAG VRNGMIVPYL PEAMAELPFA EGLKAIMLAP DDTPVALAET RIVNAQPVWT
VLRGLWSQ
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