Gene DvMF_2444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2444 
Symbol 
ID7174379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3077664 
End bp3078584 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content71% 
IMG OID643540975 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002436853 
Protein GI218887532 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACC ACGCCCCACC CCCCAACGCC GACTCCCCTG ACGCCGCCCG TCCCCTCTCC 
GCAGCCCATC CGCTGGCGGG CCGCGTGGCT CTGGTCACCG GCGGCGCGCA GGGCATTGGC 
CGGGGCATCG TGGAACACCT GCTGGCCTGC GGCATGCGCG TGGCCGCCAT GGATGCCGAC 
GCCGAGGCGC TGGCCGAACT GGCCGGAGCA TTGTCCGCCG AACTGGCCGC CGAACCGGTT 
GCCGACAATG AGGCATCGCT ACCCGCACAT CCGGATGCCT CTGCTGCGCC CCATTCCCCA 
ACCTTTCCCA TGCTGACCCT GCACGGCAGC GTGGCCGACC AGGCCGACGC GGACCGTTGC 
GTGGCCGCCA CTGTGGCCCG TTTCGGCGGA CTGCACCTGC TGGTGAACAA CGCGGGCATC 
GCCAATCCCC ATTCCGGCCC CGCCGACGTG GCCGCCATGG ACATGGACCG CTGGCAGCAC 
ATGCTGGACG TGAACCTGAC CGGCCCCATG CGCATGGTGC GCGCCGCCGT GCCCCACCTG 
CGGGCCGCGC GCGGGGCGGT GGTGAACATC GCCTCCACCC GCGCCGTACA GTCGGAACCG 
CACACCGAGG CCTACGCCGC GTCCAAGGGC GGACTGGTGG CCCTGACGCA TGCGCTGGCC 
GTCAGCCTTG GCCCGGAGGT GCCGGTGAAC TGCATCTCGC CAGGCTGGAT AGAGGTGCGC 
CACCTGCGCA AGGCGGCCCA CCGCGAAACG CCGGTGCATA CGGATGCCGA CCGCGCCCAG 
CACCCCGTGG GCCGCGTGGG CACCGTGCGC GACGTGGCCG CGCTGGTGGC CTTTCTGGCC 
GGGGATGACG CCGGGTTCGT CACAGGGCAG AACTGGCTGG TGGACGGCGG CATGACCCGC 
CGGATGATCT ACGAGGAGTA A
 
Protein sequence
MEHHAPPPNA DSPDAARPLS AAHPLAGRVA LVTGGAQGIG RGIVEHLLAC GMRVAAMDAD 
AEALAELAGA LSAELAAEPV ADNEASLPAH PDASAAPHSP TFPMLTLHGS VADQADADRC 
VAATVARFGG LHLLVNNAGI ANPHSGPADV AAMDMDRWQH MLDVNLTGPM RMVRAAVPHL 
RAARGAVVNI ASTRAVQSEP HTEAYAASKG GLVALTHALA VSLGPEVPVN CISPGWIEVR 
HLRKAAHRET PVHTDADRAQ HPVGRVGTVR DVAALVAFLA GDDAGFVTGQ NWLVDGGMTR 
RMIYEE