Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2218 |
Symbol | |
ID | 7174140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2770936 |
End bp | 2772792 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643540738 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002436629 |
Protein GI | 218887308 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 0.70593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGAA CCAGACTCCT GTCTTCCGCC CTGCGCGCGC GCCGTGCCGT CCGGCACGTG CTTGTGCTTG TGGCGGTGGC GTTGTTGGCC GCCGGCTGCG CGCCCAAGAA GAATCTTCCC CCCATTCAGC CCGCAGAGGC CTGCCCGGTG CCGTCCGGCG CCACCGCCAC CGCCGCCGAA CCCGAAGAGG TGGTGGAACT GCCCATACCG CCCGCCGACG ACGGCGTGCC CCTTACCCCG CAGGAATGGG CGGCCCTCAA TTCCACCGGC GAACTGGACA AGAACCTTTC CCCGGAAGCC CGGCGCGACG TGGAATTGCA CTTCAAGTAT TTCACCCACC GCGCGCGCGG CACCTTCGAA CGCTACCTGA AGCGTTCGCA GAACTACCTG CCGCACATCC GCGAGGTGTT CCGCCAGCAG GGCATTCCCG AAGAGATCGC CTATCTCGCC ATCGTCGAAA GCGGGTTCAA CCCCAATGCC GTGTCCCCGG CGGGCGCGGT GGGGGTGTGG CAGTTCATGC CCTACACCGG CATGCGCTAC GGCCTGTCGT ACAGCTGGTG GATGGACGAG CGGCGCGACC CGTACAAGTC GGCCCGCGCC GCGGCGGATT ATCTGCAGAA GCTGTACGGC GACTTCGGCG ACTGGCACCT GGCCATGGCC GCGTACAACG CGGGCGAGGG CAAGATTTCG CGGGCGCTGG AAGGCACCGG GGCCGAAGGG TTCTTCGACC TGCGCGCCAA GAACCACATG CTCGACGGCA AGGCCCAGCT GAAGGACGAA ACGCGCCAGT ACGTGCCCCG GTTCATCGCC GTGGCCAAGA TCATGCGCAA TCTGGAATCC CTGGGCTTTC AGGCCCCGGA CTACAGCTGC CCGCCCAAGC TGGAGCAGCT GCGGGTAAAG CCCGGCACCG ACCTGATGGC CCTGGCCCAG GCCATGGGCC AGAACTGGAG CGACTTTTCC GCCAACAACC CGGCCTTCCG GCGCTACATT TCGCCGCCTG ATGCCCACAC CACCGTCTAT GTGCACCCCA TGCACCTGGA AGCGGCCACC GCCTTCCTGG CCAAGCCGCA GCAGCGTAGC TACGCGGGCT GGCGGGTGTA CAAGGTGCGC CAGGGCGATA CGCTGGACCG CATCGGCAAG CGCTGCGGGG TGCCCGTTTC GGTGCTGAAG CGGGTCAACA AGGCCAGCGG CAAATTGCAG GTGGGGCAGG AGCTGATGAT CCCCGGCGGG GGCGACGCAA CGGACTTCAC CGCCCAGGCG GAGACGCCGG CGTCGAAGTC GGCGGCTTCG GCCAAGGGCG GCAAGGCCGT TGCGGACAAG CAGGACAAAT CGGACAAGTC GGACAGGTCG TCCTCTGTCC GCACCCGCGA CATCGCCGAG CGCCGCGCCA CGTACATCGT CAAGCAGGGC GACACCCTGT ACGGCATCGC CAAGGCCCAG GGCAGCAGTG TGGAAACCCT GCAGAAGGCC AACGGCCTTT CGGGTATCGC CCTGCAACTG GGGCAGAAGC TGTACATCCC CGATGCCGGG GCCGAGGCCA CGGCCATCGC CAGGCAGGAA GCGGAGGCCG CCAACAAGGC CATCGTGGCC AGCGCGTCTC GCGGCGGTGC CGAGCGGGCC GCCACGCCCG TGGCCGTGGC CACCGCGTCC AAGAGTGCGG GGGCCAAGCC CGCAGCCAGC CAGGCTGCCG CGCCGTCGGG CCGGGCCATC GTGTACAAGG TGCAGGAAGG CGACACCATG TGGGCCATCG CCCGCAAGTT CAACGTGCCG CCCAAGGAAC TGCTGCGCTG GAACAACCTG GAGCGCGATG CGCAGTTGAA GCCCGGCGAC CAGATCACCG TGCACGCCGC CCAGTAG
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Protein sequence | MQRTRLLSSA LRARRAVRHV LVLVAVALLA AGCAPKKNLP PIQPAEACPV PSGATATAAE PEEVVELPIP PADDGVPLTP QEWAALNSTG ELDKNLSPEA RRDVELHFKY FTHRARGTFE RYLKRSQNYL PHIREVFRQQ GIPEEIAYLA IVESGFNPNA VSPAGAVGVW QFMPYTGMRY GLSYSWWMDE RRDPYKSARA AADYLQKLYG DFGDWHLAMA AYNAGEGKIS RALEGTGAEG FFDLRAKNHM LDGKAQLKDE TRQYVPRFIA VAKIMRNLES LGFQAPDYSC PPKLEQLRVK PGTDLMALAQ AMGQNWSDFS ANNPAFRRYI SPPDAHTTVY VHPMHLEAAT AFLAKPQQRS YAGWRVYKVR QGDTLDRIGK RCGVPVSVLK RVNKASGKLQ VGQELMIPGG GDATDFTAQA ETPASKSAAS AKGGKAVADK QDKSDKSDRS SSVRTRDIAE RRATYIVKQG DTLYGIAKAQ GSSVETLQKA NGLSGIALQL GQKLYIPDAG AEATAIARQE AEAANKAIVA SASRGGAERA ATPVAVATAS KSAGAKPAAS QAAAPSGRAI VYKVQEGDTM WAIARKFNVP PKELLRWNNL ERDAQLKPGD QITVHAAQ
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