Gene DvMF_2062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2062 
Symbol 
ID7173981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2557436 
End bp2558158 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID643540579 
ProductABC transporter related 
Protein accessionYP_002436473 
Protein GI218887152 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAG ACCACACCGC CCATACCGGC AGCGCCCCGG CCATCATCGA GGCGTGCGAC 
CTTTGCAAAA GCTACCCGGC CACCGACGGC GGCGCGCCCG CGCCCGTGCT GCGCGGCGTT
TCGCTGCGCG TGTCCCCCGG CGAATTCGTG GCCGTGGCGG GCCGTTCCGG CTCGGGCAAG
TCCACGCTGC TCAACGTGCT GGCCTCGCTG ACCCTGCCCG ATTCGGGCAC GGTGCTGTTC
GACGGGCAGG ACATCACCCG CGTGTCCGAG GCCCGGCGCA ACCGCCTGCG CCACAGCGAC
TTTGCCGTGA TCTTTCAGGC CCACCACCTG ATGCCCTACC TGACCGCGCT GGAAAACGTG
CTGCTGCCGT TCATGAACGG TCTTGCACCG GTGCCCGCCG CCATGGCCGA AAAGGGCCGC
AGCGTGCTGG ACCGGGTGGG GCTTTCCGGC AAGGCGGCCT CGCTGCCGGG CGCGCTTTCC
GGCGGGGAGC AGCAGCGCGT GGCCATTGCC CGTGCACTGG TGCGCGACGC CCGCGTGCTG
TTTGCCGACG AACCCACCGG TAGCCTGGAC ACCACCACGG GCGAGGCCAT CATGGAACTG
CTGGCCGAAC TTGGCCGCGA CGGCCTGACC ACGGTGATGG TCACCCACAA CCCGGACTAT
GCCCGCCGCG CCCACCGTAC CCTGATCATG CGTGACGGCC TGATGGTTGA CGGGCTGGCC
TGA
 
Protein sequence
MTTDHTAHTG SAPAIIEACD LCKSYPATDG GAPAPVLRGV SLRVSPGEFV AVAGRSGSGK 
STLLNVLASL TLPDSGTVLF DGQDITRVSE ARRNRLRHSD FAVIFQAHHL MPYLTALENV
LLPFMNGLAP VPAAMAEKGR SVLDRVGLSG KAASLPGALS GGEQQRVAIA RALVRDARVL
FADEPTGSLD TTTGEAIMEL LAELGRDGLT TVMVTHNPDY ARRAHRTLIM RDGLMVDGLA