| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2022 |
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| Symbol | |
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| ID | 7173941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2504195 |
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| End bp | 2505976 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643540539 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_002436433 |
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| Protein GI | 218887112 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 97 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATCC TGAACCACGA GGACAGCGCC CCGCTGTACG TGCAGTTGTA CACCCAGATC
AGGGACCGCG TGCTGACGGG CGAACTGCCC GCAGGAACCC GCCTGCCTTC CGTCCGGCAC
CTGGCCGACG AGCTTGGCGT CAGCCGCAAC ACGGTGGATA CCGCCTATCT GGAGCTGATC
GCCGAAGGGT TTCTGCTCAC CCGGCCCAGA AGCGGCTTTT TCGTGGCGCC CGTGGAGCGG
CACCAGGCGT TCCGCGCGGG CATGCCGACC ACGCCCGCCG CTGCCGGCGC TGGCCCCCGC
CGCCACCCGA CCACCTCTGA CGCCCTTGGC GGATCCGGCA CTGCTGGCAT CCTTGGCACA
CCTGACGTCA CTGGCGCCGC GCACGACAGG ATGCACAACA GGACGCACGG CGGGGCGCAC
GACAGGATGC ACGGGGCGGC AGCGCCCTCT CCGTACCGGT TCGACTTTCA CCCCGCCCGG
CTGGACCCGG CGAGCTTTCC CCTGCCCCTG TGGCGCGCCT ACACCCTGGA ATGCCTGCGC
GAAGCCCCCC GCGAGCTTTC CGAATACAAC CATCCGCAGG GCGATCCGGA ACTGCGCCGG
GCCATCGGCG ACTATCTGCA ACGCTCGCGC GGGGTGGTCT GCACCCCGGA CCGCGTGATC
GTCTGCGCCG GGTTGCAGCA CAGTCTGGAA ATCGTGGCGG ACATCATGAT GCACGCCTCT
CCGAACGCCG GTGCGGGCGC GGTGGCGGGC GCTGTGGCGG GCGCCAATCC CGCAAGGCCG
CTGGTGGTCG GGGTGGAGAA CCCCGGCTAT CCCCTGCCCC GTGCCGTGTT CCGCAACCGG
GGCATTCCGG TGGTTCCCGT GCCCGTGGGG CCGGAGGGCA TGGACGTGGA CGCCCTGGCG
CAAAGCCGCT GCACGCTGGC CTACGTCACG CCGTCGCACC AGTTTCCCCT GGGGCACGTG
ATGCCGGTGC GCAACAGGCT GCGGCTCATC CAATGGGCCA ATGCGGGCGG CAATGTCATC
ATCGAGGACG ACTACGACAG CGAACTGCGC TACGCGGGCA CGCCGGTGCC CTGCATGCAG
GGGCTGCACC CCGGGGACGC GGGCAGGCAG GCCGGACCTG ACAACCCAGC CGGGCCAGCC
GGGCCAGCCG GATCAGACAA GCCAAACGGA CAAGACAGTC CTGACGGACT GGACGGGGCC
GTGGTCTACA CGGGCACCTT TTCCAAGATC CTCTCCCCGG CCCTGCGCAT GAGCTACATG
GTGCTGCCGC CCGCGCTGCT TCAGGTCTAC CGGCAACGCC ACCGCCACCA CCACGCCATG
GTCCCCCTGC TGGAGCAGCG GGTGCTGGCC CGGTTCATGG CGCGCGGGCA CTGGGACCGC
CACGTGCGGC GCATGCGCAC GGTATACCGG CAGCGCCACG ACGCCATGCT GCGCGCCATC
GACACCCACT TCGGCGGGCG GGCCACCGTG ATCGGACAGG GGGCGGGGCT GCACGTGGTG
GTCCGACTGC ACGGCACGGA TGCCGACGAG CGGGAACTGG CCCTGCGGGC CGGGCGCGCG
GGCATCCGCC TGCTGCCCTT CTCCGAAACC CGGCTGACGG ACAACCCCGA AGCCTTCCGG
GGCGGCCCAC CTGCCAGTCC TCCTGCCAGC GCTCCCCACG GATACGGAAA CACTTCCAAT
GACGGCCCCC TGCTGCTGCT CGGCTTCGGC GGCATGCCCC CCGACGAACT GGAACAGGGC
GTGGCGCAAC TGCACCGCGC CTGCTTTCCC CGCGCCCGAT GA
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| Protein sequence | MFILNHEDSA PLYVQLYTQI RDRVLTGELP AGTRLPSVRH LADELGVSRN TVDTAYLELI
AEGFLLTRPR SGFFVAPVER HQAFRAGMPT TPAAAGAGPR RHPTTSDALG GSGTAGILGT
PDVTGAAHDR MHNRTHGGAH DRMHGAAAPS PYRFDFHPAR LDPASFPLPL WRAYTLECLR
EAPRELSEYN HPQGDPELRR AIGDYLQRSR GVVCTPDRVI VCAGLQHSLE IVADIMMHAS
PNAGAGAVAG AVAGANPARP LVVGVENPGY PLPRAVFRNR GIPVVPVPVG PEGMDVDALA
QSRCTLAYVT PSHQFPLGHV MPVRNRLRLI QWANAGGNVI IEDDYDSELR YAGTPVPCMQ
GLHPGDAGRQ AGPDNPAGPA GPAGSDKPNG QDSPDGLDGA VVYTGTFSKI LSPALRMSYM
VLPPALLQVY RQRHRHHHAM VPLLEQRVLA RFMARGHWDR HVRRMRTVYR QRHDAMLRAI
DTHFGGRATV IGQGAGLHVV VRLHGTDADE RELALRAGRA GIRLLPFSET RLTDNPEAFR
GGPPASPPAS APHGYGNTSN DGPLLLLGFG GMPPDELEQG VAQLHRACFP RAR
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