Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1618 |
Symbol | |
ID | 7173532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1992579 |
End bp | 1994156 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643540135 |
Product | protein of unknown function DUF1078 domain protein |
Protein accession | YP_002436034 |
Protein GI | 218886713 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 106 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTTT CCTCCTCCAT GTATGCCAGC GTTTCTGGGC TGCTGAGCAC CGCAGAATCC ATCAGCGTCA TCGGCAACAA CCTCGCGAAC TCCAGCACCA CGGGCTACAA GTCCATGTCC ATGCTGTTCG AGGACGTGTT CTATTCCTCC ATCACCACCT CGGGCGGCAT CGACCAGATC GGCAACGGCT CCGCCATCTC TGCGATTTCC ACGGACTTTT CGCAGGGGTC GTACCAGGAC ACCTCCGAGG CCATGAACAT GGCCATCGCG GGCGAAGGGT ACTTCATCGT GGAAGACCCG CAGAACGACG GCCAAATCTA CTACACCCGC GCCGGGGACT TCACGTTCAA CACCGAAGGC TACCTGGTGA ACTCCTCCGG CTACCAGGTG CAGGGCTGGG CCGTGGACCC GGACACCGCC AGCTCCACCG ACCCGTCCAC CACCGGAGCG CTGGGCGACG TCCAGCTCAA GAGCCGCACC TCGCCCGCGT CGGCCACCAC CAACGTGACC CTGACGGTGA ACCTGGATTC CGGCGGCGAC GACAACTCCA CCTCCACCAC CGATCCGTAC TTCTCGCTGC TCACGGAATG GGACGGCAGC GCCGACGACC CCCTGGGCAC CACCAAATAC GAGTACCAGA CCACCATCAC CGTGTACGAC GAGGCCGGGT CCGCCCATGA GCTGACCGTG TACTTCGACC AGGTGGAGGA CTCCGCCACC GGCTCCACCA CCTGGGAATA CCTCGTCACC ATGAACCCCA GCGAGGACGT GCGCACCATA GGCGGCCAGA GCGTGTCGGG CACATCCGCC GCCGGCCTGC TGATGGCGGG CACGCTGTCC TTCGACGCCA CCGGCGCGCT GGTCTCGCAG ACGGCCTTCA CGCTCGGCTC CACCGCCAGC GGCGACCTGA CCGACCTTTC CAACTGGACC CTGGCCGAAC TTTCCACCGA TGGCCTGCCG GTGTTCGCGT GCAACTTTTC CGGGTCGGCC AACGCCAGCA CCACCGACGA GGCGGACGCC ATCCAGGTCG AACTGGACTT CGGCCTGTCC GCCAAGTCCA TCACCGACAG CTGGAACACC ACCGTGACCA GCGCGGCGGA CATCGGCACG GACGGCACGC TGCTGTTCGG CTTCACCTCC ACCGCCTACG ACACCGACCG CACCACCAGC CACGATTCGG CCAGCAGCAC CGACAGCTCC AGCCAGAACG GCTACGCCAC GGGCTACCTG ACCAGCTACT ACGTGGACGA GGGCGGGGTC ATCTACGCCA CCTACTCCAA CGGCCAGACC CAGGCCCTGT TCATCGTGGC CCTGGCCAGC TTCAACAACG ACCAGGGCCT GCAACTGGAA GGCGGCAACC TGTACTCGGC CACCACCGAG TCGGGCACGG CCAACATCGG CAGGGCCGGG CAGGGCATCT ACGGCAGCAT CTACGGAGAA AAACTGGAGG AATCCAACGT GGACGTCTCT ACCGAGATGG TCGACCTCAT CGTGATGCAG CGCGCCTACC AGGCCAACAG CAAGGTCATC ACCACCGTGG ACGAAATGCT TCAGACCGCG CTGGGCCTGA AGCGCTAA
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Protein sequence | MGLSSSMYAS VSGLLSTAES ISVIGNNLAN SSTTGYKSMS MLFEDVFYSS ITTSGGIDQI GNGSAISAIS TDFSQGSYQD TSEAMNMAIA GEGYFIVEDP QNDGQIYYTR AGDFTFNTEG YLVNSSGYQV QGWAVDPDTA SSTDPSTTGA LGDVQLKSRT SPASATTNVT LTVNLDSGGD DNSTSTTDPY FSLLTEWDGS ADDPLGTTKY EYQTTITVYD EAGSAHELTV YFDQVEDSAT GSTTWEYLVT MNPSEDVRTI GGQSVSGTSA AGLLMAGTLS FDATGALVSQ TAFTLGSTAS GDLTDLSNWT LAELSTDGLP VFACNFSGSA NASTTDEADA IQVELDFGLS AKSITDSWNT TVTSAADIGT DGTLLFGFTS TAYDTDRTTS HDSASSTDSS SQNGYATGYL TSYYVDEGGV IYATYSNGQT QALFIVALAS FNNDQGLQLE GGNLYSATTE SGTANIGRAG QGIYGSIYGE KLEESNVDVS TEMVDLIVMQ RAYQANSKVI TTVDEMLQTA LGLKR
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