Gene DvMF_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1410 
Symbol 
ID7173314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp1723871 
End bp1724404 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content72% 
IMG OID643539917 
ProductShikimate kinase 
Protein accessionYP_002435826 
Protein GI218886505 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value0.702119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG GAAAGCGGCA GGCGCGGCGG GTGTACCTGG TGGGGCCGCG CGCCAGCGGC 
AAGACCACGG TGGGCAAGGC TCTGGCAGCC CGCGCCGGTT GGCATTTCGA GGATACCGAC 
GCCACGGTCG CCGCCCTGGC GGGGATGACC GTGGAGCAGA TCGTTGAGCG CGAAGGCTGG 
GAAGGATTCC GGCGGCGCGA AACCGAGGCC CTGCGCGCAA CCCTTGGCCA TGACGGTCTG 
GTGGTGGCCA CCGGCGGCGG CATGGTGCTG GCGGAAGAAA ACCGGCGCAT GCTGCGGGAC 
GGGGGCCTTG TGGCCTACCT GTGCGGCAGC GTGGACCTGC TGGCGGGACG CCTTGCGCGC 
GACCCGCTTG CCGCGCAGCG CCCCTCGCTG ACCGGGCGGC CCATTGCTGA CGAGGTGGCC 
GAGGTGCTGG CCGCGCGCGA ACCCCTGTAC CGTGAATGCG CGCATGTGGT GCTGGACGCC 
GGGGACGACC TGCGGGTGCT GGTGGAGCGG CTGGCCAGCC TGCTGGAAGG GTAG
 
Protein sequence
MNDGKRQARR VYLVGPRASG KTTVGKALAA RAGWHFEDTD ATVAALAGMT VEQIVEREGW 
EGFRRRETEA LRATLGHDGL VVATGGGMVL AEENRRMLRD GGLVAYLCGS VDLLAGRLAR 
DPLAAQRPSL TGRPIADEVA EVLAAREPLY RECAHVVLDA GDDLRVLVER LASLLEG