Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1019 |
Symbol | |
ID | 7172914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1235111 |
End bp | 1236346 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643539525 |
Product | peptidase dimerisation domain protein |
Protein accession | YP_002435442 |
Protein GI | 218886121 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 0.675627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAT CCACAGACAC CTTCGCCCGA TTCGCGGAGC AGGCCCGCGC CTGCCTGCCC TCCGGGCTGG ACGAGGCTAC CGCCTCGGAC ATCGCCGACA TGGTGGCGCT GACCGCCCGG CTCATGGCCA TCCGCTCCAC GGCCTCGCGC CCGGAAGAAC TGGCCCGCTG CGCCGACGTC ATCGCCGCCT GGCTGGCCGA CAACAACATT CCCTGCACCC GCATGGAGCA CGAGGGCGTG CCATCCCTTA CGGCGGGCAA CCCGGCCCAC GCCGCGCCGC TGGCCTTGCT GGTGCACTTC GACGTGGTGG ACGGCGCGGA CGTCATGTTC GCACCGCGCC TGGACCTGAC GGAGGGCGTG CTGCACGGGC GCGGCAGCAT CGACGACAAG TACGCCGTGG CGCTGGCCCT GGTGCTGTGC CGCCGCTGCC TGCGCGAGCT TGCGGCACGG GGCCTTGGCC CGGATGCCCT GCCCCTGGTG CTGGTGATCA CCGGCGACGA GGAAACCGGC GGTCGCAATG GCGCCTTCCG CGTGCTGCCG CACATCCGCG CCGACTTCTG CGTGGCGCTG GACGGCGGTT CGCCGGGCTC GGTCATCACA AAGGAAAAAG GGGTCATCGA CCTGGTGCTC ACGGCGCGGG GCAAAAGCGC CCACGGCGCC CGGCCCTGGC TGGGCGAAAA CGCCGTGGAT GCGCTGGTGC GCGACTACGA GGCCCTGAAG CCCCTCTTTC CCGGCCTGTA TCCGGAACGG GCGGGGCTGG CAGCGCCTGA TGCGCCGCCC CCCTCCGCCG TGTTGCCGCA GGCGGAGGCC CACTGGCACC GCACCCTCAA CCTGGGCCTG CTGCACGCGG GCACGGCGGT GAACCAGGTA CCCGGCGAAG CCGTGGCCCA TCTGGACGTG CGCTACACGG AGCACGACAA CCCCCACCAA CTGGTGGCCG CCATGCGTGC CGCCGTGCGA GGCGAACTGG CCGTCACCCG CATGGAGCCG CTGTTCGTCA CCGGCGACAC CCCGTGGCTG GACAGGCTGT TGCGCCACGC CCCCGGCGCG GCCACCGGCT GCGCCCACGG GGCCAGCGAT GCCCGGTTCC TGACCGATCT TTCCATGGCC GGGGTGGTCT GGGGCGCGGA AGGCGAAACC AGTCAGCACA CCGACCACGA ACACCTGCTG ATCCCCAGCC TGGTGCCGGT GTACCAGGCC CTGCTGGCCC TGGCGCGCGA TGCGGCCAAC GGATAG
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Protein sequence | MSQSTDTFAR FAEQARACLP SGLDEATASD IADMVALTAR LMAIRSTASR PEELARCADV IAAWLADNNI PCTRMEHEGV PSLTAGNPAH AAPLALLVHF DVVDGADVMF APRLDLTEGV LHGRGSIDDK YAVALALVLC RRCLRELAAR GLGPDALPLV LVITGDEETG GRNGAFRVLP HIRADFCVAL DGGSPGSVIT KEKGVIDLVL TARGKSAHGA RPWLGENAVD ALVRDYEALK PLFPGLYPER AGLAAPDAPP PSAVLPQAEA HWHRTLNLGL LHAGTAVNQV PGEAVAHLDV RYTEHDNPHQ LVAAMRAAVR GELAVTRMEP LFVTGDTPWL DRLLRHAPGA ATGCAHGASD ARFLTDLSMA GVVWGAEGET SQHTDHEHLL IPSLVPVYQA LLALARDAAN G
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