| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0279 |
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| Symbol | |
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| ID | 7172161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 318993 |
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| End bp | 320738 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643538775 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_002434704 |
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| Protein GI | 218885383 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.253469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGA CCGACAACGC CTCCCGCTTG CATCAACCCC ACCCGGACCT GCTCCATGCG
GATCTGCCCC ATGCAGACCT GCCCGCCCCG GAGGAAATGG CCGCGTGGGA CCGCGCCGCC
AGCGCGGACT TCGGCCTGCG CGAGGAAATC CTGATGGAGA ACGCCAGCCG CGAGGCGCTG
CACGTGCTGC GCGCGGAACT GGCCGCGTCC GTCACCAAAA CCGGCACGCC CATTGCGTCC
GGCACATCCG GCACATCCGG CACATCCGGT ACGCCCGGCA CGCCCGCTAC GCGCAACGCG
CCCTCCCCGG CCTCACCCCC CTTCTCCTTC ACCGGCCTGC GGGTGCTGCT GTTCATGGGC
GGCGGCAACA ACGGCGGCGA CGCTGCCGCC CTGGCCCGCC ACCTGCACGA CGCCGGGGCC
GAGGTGCTGG TGCTGCACAC CCGCCCGTTG GGCGGCTATC GCGGTGCGGC GGGGTACCAT
GTCCGCCTTG CCAAACGTTG CGGTGTGCCT TTCCGCCCCG CCGGGGCGTG GCCGCGCAGC
CTGCCCGACC CGCGCTGGCT GGCGCCCCAT GCGGTGGTGG ACGGCCTGCT CGGCACCGGC
TTCACCGGGG TGCTGCGTGA ACGGGAAGCG GGGCTGGTGG CCGCCATCAA CGAGCTTGCC
GCCCGGGCCT TCGTGCTGGC GCTGGACATT CCCTCCGGCC TCGGCGGCCT GACGGGCCGC
CCCCGGCCCG GCGCCGTGCG CGCCCATGCC ACCGTGACCT TCGAGGCGGC CAAGCCCGGC
CTTGTCCTGC CGGAGGCTGC ACCCTACACG GGCCGCCTGC ATGTGCGGCC CATCGGCATT
CCGCAGGCCG TGCGCGCGCG CCACCCCGCC TCGTACCGCA TGCTGGACGA CACCTGCCTT
GCCGCCCTGC CCGCCACCAC CCCCTGCATG CACAAGGGCA CCGCCGGGCA CGTGCTGGTG
GTGGGCGGAT CGGAAGGCCT CACCGGCGCG CCGCTGCTGG CGGGGCTGGG CGCACTGCGC
GGCGGTGCGG GCCTGGTTAC CGTGGCCTGC CCCGGCGGCC TTGCCGCAGA GGTCAAGGCC
GCCACCCCCG ACGTGATGAC CCTGCCCCTT GGCGAACGCC GCGCCTGGGA CCCTGCCGCC
CTGCCCGGCC TGCTGGCGCT GGCGACACGT TGCAATGCGC TGGTGATCGG CCCCGGCATG
GGGCGCTCGC CGGAAGCAGC AGAGGTGCTG TCCGCCCTGC TGGCGCTGCC CGGCAGGCCA
CCGGCCGTCA TCGACGCCGA CGGCCTGTTC CCGCTGGCGG AAGGCCTTGT TTCGCTTGAT
TTGGTGCGTG AAACGGATAT TGTTACCCCC CACCCCGGCG AAATGGCCCG TCTTGCGGGC
CTTACCACGG CGGATGTGCA ACGCGGCAGG GCAGCCACGG CACGGGCCTT CGCGGCGCGC
TGCGCGGGGG TGCTCGTGCT CAAGGGCGCG GGCAGCCTCG TCACCCGGCG CGACCGGCCC
ATCACCATCA TTCCCCTTGC CGCACCCACG CTTGCCGTGG CCGGTTCCGG CGACGTGCTT
TCCGGCCTTG CCGGTGCCCT GCTGGCGCAG GGCGCACCGC CAGAGGTGGC CGCCTGCCTT
GCCGCATATC TGCATGCCAA GGCCGGGCAA CTGCTGCTGC ACGACTACCC CGCACGGGGC
AACACCCCGA GCGAAATCGC CGACGCCATC CCCCGCGCGC GAAAGGAGCC CACCCCATGC
TGCTAG
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| Protein sequence | MTPTDNASRL HQPHPDLLHA DLPHADLPAP EEMAAWDRAA SADFGLREEI LMENASREAL
HVLRAELAAS VTKTGTPIAS GTSGTSGTSG TPGTPATRNA PSPASPPFSF TGLRVLLFMG
GGNNGGDAAA LARHLHDAGA EVLVLHTRPL GGYRGAAGYH VRLAKRCGVP FRPAGAWPRS
LPDPRWLAPH AVVDGLLGTG FTGVLREREA GLVAAINELA ARAFVLALDI PSGLGGLTGR
PRPGAVRAHA TVTFEAAKPG LVLPEAAPYT GRLHVRPIGI PQAVRARHPA SYRMLDDTCL
AALPATTPCM HKGTAGHVLV VGGSEGLTGA PLLAGLGALR GGAGLVTVAC PGGLAAEVKA
ATPDVMTLPL GERRAWDPAA LPGLLALATR CNALVIGPGM GRSPEAAEVL SALLALPGRP
PAVIDADGLF PLAEGLVSLD LVRETDIVTP HPGEMARLAG LTTADVQRGR AATARAFAAR
CAGVLVLKGA GSLVTRRDRP ITIIPLAAPT LAVAGSGDVL SGLAGALLAQ GAPPEVAACL
AAYLHAKAGQ LLLHDYPARG NTPSEIADAI PRARKEPTPC C
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