| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_1479 |
|---|
| Symbol | |
|---|
| ID | 7081914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | - |
|---|
| Start bp | 1488542 |
|---|
| End bp | 1489915 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643458588 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_002353367 |
|---|
| Protein GI | 217967861 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0327327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAG TAAAGAGCAA GTTTGTATGT CAAGTATGTG GATATGAGAG TGTAAGATGG
TTTGGCAGAT GTCCTAACTG TCAAAGTTGG AATTCCTTTA TTGAGATTAC CGAAAAAAAG
CAGGGTTTTA ATAATAGAGA AAGTAAAGAA AATTTGGGGG TATATAGATT AGAAGATATT
TTGAATTATG AGCCTGTCAG GTTGAAAACG GGCCTGACAG GTTTTGATTA TGTTATTGGT
GGGGGAATTG TGGAGGGGGA AGTAATTCTC TTGGCAGGAG AGCCTGGAAT TGGCAAATCT
ACGTTACTTT TGCAACTTGC TATATCGCTT GATAAAAATG ATACAAGAGT TTTATACATC
TCTGCCGAAG AATCTTTATC ACAGGTGGGA CTAAGATTAA GGAGATTAAA TTCAGGTGAT
AAGTTAAATA TTGATTTTGT GTCTGAAAGA GATATTGAAA ATATATTACC AAACCTTGAA
AATTCTAACT ATTCACTAAT AATTGTAGAC TCTATTCAAA CAATTTATTC CTCTGAGTTT
CCTACTTCTC CGGGAAATGT GGTTCAGGTG AGAGAATGTA CTTCTAAATT AGTAGATTTT
GCGAAGAAGA ATAATATAGC TGTCATATTA GTCGGGCATG TTACTAAGGA AGGAGATATT
GCAGGACCTA AAATATTGGA ACATTTAGTT GATGCGGTTT TATATCTTGA GGGTGAAAGA
TATCATGATT TAAGGATATT AAGAGTAATT AAAAACAGAT TTGGTCCTAC TAATGATTTC
ATACTCTATG AGATGAAAGA AAATGGACTT TTTGAAGTAG AGGATATCTC TGCAAAGGTA
ATTGAAAATA GAAATACTAA TGTTTCAGGA TCTATTATTA TACCAATTAT GGAAGGAACA
AAACCATTAT TGATAGAATT GCAGACCCTT GTAAGTAGAA CAAATACATC ATATCCCAGG
AGGATTACTT CAGGTATAGA TCTTAATAAA TTGGTGCTTA TATTGGCCAT TCTTGAGAAA
AAGCTAAATA TTAGTTTCTC TGATAAAGAT GTATTTGTAA ATGTAGTGGG TGGAATAAAA
ATAAGTGAAC CTGCAATAGA TTTAGGACTT GCCTTTGCTC TACTTTCTGC GTTGATAAAT
AAACCTTTTC CATCTGATAT GGTAGCTATA GGGGAGATAG GACTCGGGGG AGAGGTTAGA
ACTGTTCCTC ACATAGAAAG AAGGTTAAAA GAAGCAAAGA AATTTGGCTT TAATAAAGCA
TTAATTCCTA AGGACAGCAA AGTTAAGTCG TATGAATATA ATATGAATGT GCGGACTATT
ACAGATATTG GTGAGGGAAT AGATTTAGTT TGGGGGGAAA AATGGCGGAG TTAA
|
|---|
| Protein sequence | MSKVKSKFVC QVCGYESVRW FGRCPNCQSW NSFIEITEKK QGFNNRESKE NLGVYRLEDI
LNYEPVRLKT GLTGFDYVIG GGIVEGEVIL LAGEPGIGKS TLLLQLAISL DKNDTRVLYI
SAEESLSQVG LRLRRLNSGD KLNIDFVSER DIENILPNLE NSNYSLIIVD SIQTIYSSEF
PTSPGNVVQV RECTSKLVDF AKKNNIAVIL VGHVTKEGDI AGPKILEHLV DAVLYLEGER
YHDLRILRVI KNRFGPTNDF ILYEMKENGL FEVEDISAKV IENRNTNVSG SIIIPIMEGT
KPLLIELQTL VSRTNTSYPR RITSGIDLNK LVLILAILEK KLNISFSDKD VFVNVVGGIK
ISEPAIDLGL AFALLSALIN KPFPSDMVAI GEIGLGGEVR TVPHIERRLK EAKKFGFNKA
LIPKDSKVKS YEYNMNVRTI TDIGEGIDLV WGEKWRS
|
|---|
| |