Gene Dtur_0879 details

Gene Information

• Locus tag: Dtur_0879
• ID: 7082834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dictyoglomus turgidum DSM 6724
• Kingdom: Bacteria
• Replicon accession: NC_011661
• Strand: +
• Start bp: 906583
• End bp: 907008
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 643457955
• Product: prepilin-type N-terminal cleavage/methylation domain protein
• Protein accession: YP_002352774
• Protein GI: 217967268
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGG GGGGTTTTAG TTTAATTGAA CTTCTTGTGG TGATAGTTAT TATATCTATT 
CTTGCCCTTA TAGGAGTTTC AGGTTATTCC ATGTATTTAG AGAAAGCAAG AGAAAGTTCT 
GCAAAAAGTG CTCTCAAGGC TATACAGGTT GCAGTAGAAA TGTATTCTAC AGACAATAAA 
GGAAAATATC CTATTGCAAA TAGTTTGAAT GAGTTAAAAG CGCAGATACT GAACTATTTA 
CCAAACAGAG AGTACCCAAA TAATCCTTAC AATAATATGC CTTACTCAGA TGAGAATAAT 
GATCATTATA AGATTACATA TACCTATGAT GCCTTAGAAA ATTCTTACGT GTTGACAGTG 
ATGGATAGGT ATAATATAAA AAGAATATAT CTTCTTTCTA ATAAAATTAC TTCTATAGGA 
GAGTGA 

 

Protein sequence

MNKGGFSLIE LLVVIVIISI LALIGVSGYS MYLEKARESS AKSALKAIQV AVEMYSTDNK 
GKYPIANSLN ELKAQILNYL PNREYPNNPY NNMPYSDENN DHYKITYTYD ALENSYVLTV 
MDRYNIKRIY LLSNKITSIG E