| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3518 |
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| Symbol | |
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| ID | 7384644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3771307 |
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| End bp | 3772437 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643656837 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002554943 |
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| Protein GI | 222112679 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA TCCATGTCGT ATTGGCCATC GCCTGCGCCT CTTTGCTGAC GGCGTGCGAT
GTCAAGCATT TCTTGCCCGG CGCCTATGCT GCGGAGGGCA AGCCAGAAAC CGCCGATGTG
CAGCGCGACG GCGCATTCGT CAACGTGCCT GCGGCATCGC CGCTGCGCAA GAGCCTGGTT
GTCGCCAGCG TCGAGCCGCA GGCGTTCGCT CAGACGATCG ACGCGCCGGG CACGATCGAG
GCGGCGCCCG AGAAGCTGGT GAAGATTGCA CCGCCGTTGG GCGGGCGCAT CGTGCGCCTG
CACCACCAGC TAGGCGATGC GGTCAAAGCA GGTGACCCGC TGGTCACTAT CGACTCACCT
GATCTCGGCT CTGCCTATAA CGACCAGATC AAGGCACAGG CGGCGCTGCT GCAGGCCCGC
CGGGAGTTCG ATCGGCAGAA GGCTCTGAAA GACGACGACA TCTCTGCAGG GAAGGATTTC
GAGGCCGCAC AACTGGCGCT ATCCGCTGCC GAGAGCGATG CCCGCGCGAC GAGCAACCGG
CTGGCTCAGC TTGGCGCATC TGCCAGCGCC GGGTCGCGGC GCGAATACGT GCTGCGCGCT
CCCATCGCTG GCCGTGTGGT CGAGATGAAT GGCGCTCAGG GCAGCTATTG GAGCGACACC
ACCGCGTCGA TCATGACGGT CGCCGATCTT TCCACCGTAT GGCTTGCAGC CAGCGTCGCG
GAGAAAGATC TAGCGCAGAT GTTCGTTGGT CAGACAGCGC GTATCGTTCC CAACGCCTAC
GCCAGCCGCG AATTCGATGG CAAGGTGAAA TACATCGGCG ATTTGCTTGA CCCCGACACG
CGCACAGCGC GCGTTCGCGT CGCCATCGAC AACCGCAGTG GCTTGTTCAA ACCGGGCATG
TTCGCCCGCG TCAGCTTCTC CGGCCCAGCA CATTCGGCAC TGCTCGTCCC GGCAACGGCC
TTGTTGCAAA GCGGCCTCTA CACGCGAGTG TTCGTCGAAC AGGCGCCGTT CCGTTATGAG
TCCCGCATCG TTAGCGTGGG GACGACGGTC GCCGATCGCG TCGAGGTGTT GTCCGGGTTG
AAGGCGGGCG AGCGCATCGT GGTCAAGGAC GGGGTGCTGC TCAATGATTA A
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| Protein sequence | MKIIHVVLAI ACASLLTACD VKHFLPGAYA AEGKPETADV QRDGAFVNVP AASPLRKSLV
VASVEPQAFA QTIDAPGTIE AAPEKLVKIA PPLGGRIVRL HHQLGDAVKA GDPLVTIDSP
DLGSAYNDQI KAQAALLQAR REFDRQKALK DDDISAGKDF EAAQLALSAA ESDARATSNR
LAQLGASASA GSRREYVLRA PIAGRVVEMN GAQGSYWSDT TASIMTVADL STVWLAASVA
EKDLAQMFVG QTARIVPNAY ASREFDGKVK YIGDLLDPDT RTARVRVAID NRSGLFKPGM
FARVSFSGPA HSALLVPATA LLQSGLYTRV FVEQAPFRYE SRIVSVGTTV ADRVEVLSGL
KAGERIVVKD GVLLND
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