| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3517 |
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| Symbol | |
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| ID | 7384643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3768186 |
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| End bp | 3771314 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643656836 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002554942 |
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| Protein GI | 222112678 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.416534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAACG CCATCGTCAA CACCTGTTTC CAACGCCGCG GCATCGCCTG GCTCGTGTTC
GTGTTCGTGG CTCTGTACGG CGCCTGGAGC TGGAAGCAGC TCCCGATCGA AGCCTATCCA
GACATCGCCG ACGTGACCTC GCAGATCGTC ACGCAGGTGC CTGGACTCGG CGCCGAGGAG
GTGGAGCAGC AGATCACCAT TCCGCTGGAG CGCGCCTTGC TCGGCACGCC GGGCATGCAT
GTGCTGCGCT CGCGCAGCCT CTTCGCGCTC TCCCTCATCA CCGTGGTCTT CGAGGACGGC
ACCGACGGCT ACTTCGCGCG CCAACGGCTG CAGGAGCGGC TGAATCAAGT GTCGCTGCCC
TACAGCGCTG TGCCTGGCCT CGACCCGTAC ACCTCACCAA CGGGCGAGAT CTACCGCTAC
ACGCTGGAGT CCAAATCGCG CAGCCTGCGC GAACTATCCG AATTGCAGTT CTGGACAGTG
ATCCCGCGCC TGAAGAAGGT TCCGGGTGTC GTGGACGTGA GCAACTTCGG TGGCCTGACG
ACGCAGTTCA TGCTCGAACT CGATCCCGAC CGGCTGCGCC AGTACGACCT GTCTCTGCAG
GACGTCAAGA GCGCGATCAA TGCGAACAAC GCCAACGGTG GTGGCAGCAT CGTCGATCGC
GGCGAGCAGA GTTACGTGGT GCGCGGCGTC GGCTTGCTGC GTTCGCTTGA CGACATGGGC
AATGTCGTGG TCAAGACCAA GAACGGCGTC CCGGTGCTGG TGAAGGATTT GGGCACGCTT
GCCTACGGCA ATGTCGAACG CCGCGGCATC CTCGGCAAGG ACGGCAACCC CGACACGATC
GAAGGCATCA CGCTGCTGCT GAAGGACTAC AACCCGTCGA ATGCGCTCGC GGGCGTCCAC
GCGGCCGTGC GCGACCTCAA CGAGAACCTG CTGCCCAAGG ACGTGAAGGT CGTGCCGTAC
CTCGACCGCA CGTCGCTGAT CGACGCCACC CTGCACACCG TGGGCTTCAC GCTCGCCGAG
GGAATGGTGC TTGTCAGCGT GGTGCTGCTG CTGTTTCTCG GCAGCCCGCG CGCAGCAGCC
ATCGTCGCCT TGACGATTCC GCTGTCGCTG CTGATCGCGT TCATCTTCAT GCACCATTTC
AAGATTCCGG CGAACCTGCT GTCGCTCGGT GCCATTGACT TCGGCATTCT GGTGGACGGC
GCCGTGGTGC TGGTCGAGAA CATCCTGCGC AAGCGCGAGG AGAACGAGGG CCGCCCCCTG
CAGGCGCAGG ATGCCATCCA GGCGACACTG CAGGTCGCGC GGCCGATCTC TTTCGGCATG
GCCGTGATCG TCTGCGCCTA CCTGCCGCTG TTTGCCTTCC AGCGCATCGA ATACAAGCTG
TTCTCGCCGA TGGCCTATGC AGTCGGCGCG GCACTGGTCG GTGCGCTGGT CGTCGCGCTC
ACGCTGATTC CGGCCCTGGC ATGGCTGGCC TTCCGCAAGC CGCGCAAGGT GTTCCACAAC
CCGGTGATCG ACGCACTGTC CGCACGCTAT GCCTGGTTCC TCAGGCGCGC GCTGGGCAAG
ATCCGCTGGC TCGTTGCCAC CTGCGCCGCT GCCGCGTTGG GCCTGGGCGT ACTGTTTTCC
ACCATCGGGC GGGACTTCCT GCCGTACCTG GACGAAGGCT CGCTGTGGCT GCAGGTGCAG
ATGCCGCCCG GCATCACGCT GGACAAGGCG TCGGCGATGG CGAGCGATCT GCGACGGGCG
ACGCTGGAGT TTCCCGAAGT CTCCTACATG GTCACGCAGA CCGGCCGCAA CGACGACGGT
ACCGACTACT GGACGCCTTC GCACATCGAG GCGAGCGTGG GATTGCATCC CTACAAGGAG
TGGAAATCCG GCCTGACCAA GCAGGAGCTG ATTGCCCAGC TGGCCGCGCG CTACGCGCAG
ATGCCCGGTT ATACGGTCGG ATTCATGCAG CCCATGATCG ACGGCGTGCA GGACAAGCTG
TCGGGCGCGC ACAGCGACCT CACGGTCAAG GTCTTCGGCG ACGACCTGGC CGAGGTTCGC
GGCGTCGCCA ACCGGCTCGC TGACGTGCTC AAGCAGGTAT CGGGCTCCGC GGATGTCGCG
GTGGACGTGG AGCCACCGCT GCCTAACCTG AAGATCGCGC TCGACCGCGC CGCCGCTGCG
CGCCACGGCA TCAACGCGGC CGACGTGGCC GACCTGATCG CCACTGGCAT CGGCGGCACG
CCGATCGGCC AGCTCTATGT CGGCGAAAAA AGCTACGACA TGACCGCGCG CTTCCCGGCG
AAGTCCCGGT TTAGCCCGGA TGCTATCGGC AACTTGGCGC TGAAGGCCCC ATCAGGCGAG
CGGGTTCCGC TCTCAGACGT GGCGCATATC GGCACGGTTT CCGGCGAAAG CGTGATCGTG
CGAGAGATGG CGCGGCGCAA CATCATTGTG CGGCTGAATG TGCGTGGCCG CGATCTGGCG
AGCTTTCTGA ACGAAGCCCA GGCCGTCGTT CAGCGCGAGA TGAAGTTCGA TTCCAAGCGC
ATCCAGCTCA TGTGGGGCGG CCAGTTCGAG AACCTGGAGC GCGCCGAGGC GCGGCTGGCG
CTGATTCTGC CGATGACGCT GGGCATCATG TTCCTGCTGC TATTCGGCGC CTTCCGCAAC
CTGCGCCAGC CACTGCTGGT GCTGGCCACG GTGCCCCTGG CCATGCTTGG CGGGCTGGCA
GGGCTGCATT TGCGCGGCAT GACGCTCAAC GTATCGAGCG CGGTCGGGTT CATCGCGTTG
TTCGGTGTGG CCGTGCTGAA CGGCGTGCTG ATGCTCGCGC AGATCAATCG CCTGCGCGAT
GAGGAAGGCA AGTCCTTGCG CGATGCGGTG CTCGAAGGTG CCCGCAGCCG GATGCGTCCT
GTCCTGATGA CGGCAACAGT GGCTGCCCTC GGCCTCACAC CCGCCATGCT GGCCACCGGA
TTGGGAAGCG ACGTGCAGCG ACCGCTCGCC ACGGTCGTCG TGGGCGGCCT GCTGACCGCC
ACCGTGCTGA CCCTGGTGCT GTTGCCATCG CTGTACCACC TGATCGAAGA ACGTCTGGCA
CGCCGGCAAG CCCGGCTCGC GGCGTTGACC GTCTCGCCAC AGGAGACACA ACCGGGAGCG
CAACCATGA
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| Protein sequence | MINAIVNTCF QRRGIAWLVF VFVALYGAWS WKQLPIEAYP DIADVTSQIV TQVPGLGAEE
VEQQITIPLE RALLGTPGMH VLRSRSLFAL SLITVVFEDG TDGYFARQRL QERLNQVSLP
YSAVPGLDPY TSPTGEIYRY TLESKSRSLR ELSELQFWTV IPRLKKVPGV VDVSNFGGLT
TQFMLELDPD RLRQYDLSLQ DVKSAINANN ANGGGSIVDR GEQSYVVRGV GLLRSLDDMG
NVVVKTKNGV PVLVKDLGTL AYGNVERRGI LGKDGNPDTI EGITLLLKDY NPSNALAGVH
AAVRDLNENL LPKDVKVVPY LDRTSLIDAT LHTVGFTLAE GMVLVSVVLL LFLGSPRAAA
IVALTIPLSL LIAFIFMHHF KIPANLLSLG AIDFGILVDG AVVLVENILR KREENEGRPL
QAQDAIQATL QVARPISFGM AVIVCAYLPL FAFQRIEYKL FSPMAYAVGA ALVGALVVAL
TLIPALAWLA FRKPRKVFHN PVIDALSARY AWFLRRALGK IRWLVATCAA AALGLGVLFS
TIGRDFLPYL DEGSLWLQVQ MPPGITLDKA SAMASDLRRA TLEFPEVSYM VTQTGRNDDG
TDYWTPSHIE ASVGLHPYKE WKSGLTKQEL IAQLAARYAQ MPGYTVGFMQ PMIDGVQDKL
SGAHSDLTVK VFGDDLAEVR GVANRLADVL KQVSGSADVA VDVEPPLPNL KIALDRAAAA
RHGINAADVA DLIATGIGGT PIGQLYVGEK SYDMTARFPA KSRFSPDAIG NLALKAPSGE
RVPLSDVAHI GTVSGESVIV REMARRNIIV RLNVRGRDLA SFLNEAQAVV QREMKFDSKR
IQLMWGGQFE NLERAEARLA LILPMTLGIM FLLLFGAFRN LRQPLLVLAT VPLAMLGGLA
GLHLRGMTLN VSSAVGFIAL FGVAVLNGVL MLAQINRLRD EEGKSLRDAV LEGARSRMRP
VLMTATVAAL GLTPAMLATG LGSDVQRPLA TVVVGGLLTA TVLTLVLLPS LYHLIEERLA
RRQARLAALT VSPQETQPGA QP
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