| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2816 |
|---|
| Symbol | |
|---|
| ID | 7384927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3001234 |
|---|
| End bp | 3002823 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643656125 |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_002554250 |
|---|
| Protein GI | 222111986 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0029] Aspartate oxidase |
|---|
| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0796143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAC ACGACTTCGA CGTACTCATC GTAGGCAGCG GCCTCGCAGG GCTGACCGCC
GCGCTGCAGC TGGCGCCCAC CCACCGCGTG GCCGTCCTCA CCAAGCGCCA GTTGGCCGAC
GGCGCCAGCG GCTGGGCCCA AGGCGGCATC GCCGCGGTGC TGGCGGAGGG CGACAGCTTC
GAGTCGCACG TGCAGGACAC GCTGGTGGCC GGCGCCGGCT TGTGCGACCT GGCGGCCACA
CGCTTCGTGG TGGAGAACGC GCCGCAGGCC ATCCGCTGGC TGCAGGGCCT GGGCGTGCCG
TTCTCGCAGG AAGAGGGCGC CCTGCACCTC ACGCGCGAAG GCGGCCACAG CGCGCGGCGC
ATCGTGCACG CCACCGACGC CACGGGCGCG GCCGTGCAGC GCACGCTGAT CGACGTGGTG
CGCGCCACGC CCGGCATCAC GCTGTTCGAA CACCACACCC TGGTGGACCT GATCACCAGC
GCCAAGCTGG GACTGGCTGG CGCGCAGCGC TGCCTGGGCC TGTACGCGCT GGACGAGGCC
ACCGACGAGG TACTCACCTT TCGCGCACCG CACACCATCC TGGCCACGGG CGGCGCGGGC
AAGGTGTACC TGTACACCAC CAACCCCGAC ACGGCCACGG GCGACGGCAT TGCCGCGGCC
TGGCGCGCGG GCTGCCGCGT GTCCAACCTG GAGTTCATCC AGTTCCACCC CACGTGCCTG
TACCACCCGC ACGTCAAGAG CTTCCTCATC ACCGAGGCCG TGCGTGGCGA GGGCGGGCAA
CTCAAGCTGC CGCCGCAGGC CGGCGGCACG CGCTTCATGC CCCAGCACGA CGCGCGCGCC
GAGCTGGCGC CGCGCGACAT CGTGGCGCGC GCCATCGACT TCGAGATGAA AAAGCACGGC
CTGGACTGCG TGCACTTGGA CATCTCGCAC CAAAGCCCCG CGTTCCTGCA GGAGCACTTT
CCCACCATCC TCGCGCGCTG CGCGGAGCTG GGCATCGACA TCACGCGCGA GCCCATCCCC
GTGGTGCCCG CCGCGCACTA CACCTGTGGC GGCGTGCTGA CCGACCTGGC GGGCCGCACC
GACCTGCACG GCCTCTTCGC CATTGGCGAG ACCGCCTGCA CCGGCCTGCA CGGCGCCAAC
CGCCTGGCCA GCAACTCGCT GCTGGAATGC ATGGTGTTCG CGCGCGCCGC GGCCGCGCAC
ATCCAGCAGG CGCAGCGCGC GGACCTGCCC GCGCTGCCCG CGTGGGACGA CAGCCGCGTG
ACCGACGCCG ACGAGTGCGT GGTCATCTCC CACAACTGGG ACGAGCTGCG CCGCTTCATG
TGGGATTACG TGGGCATCGT GCGAACCACC AAGCGGCTGG AGCGCGCGGC GCACCGCATC
GCGCTGCTGC AGGGCGAGAT CCAGGAGTTC TATGCCAACT TCCACGTCAC GCGCGACCTG
CTGGAACTGC GCAACCTGGT GCAGGTGGCC GACCTGATCG TGAAAAGCGC GCAGATGCGC
CATGAAAGCC GCGGCCTGCA CTTCAGCCGC GACTGGCCCG ACGTGGCCGC CCCCGCCGCG
CCCACCATCC TGGTGCCGCC CGCACGCTGA
|
|---|
| Protein sequence | MTSHDFDVLI VGSGLAGLTA ALQLAPTHRV AVLTKRQLAD GASGWAQGGI AAVLAEGDSF
ESHVQDTLVA GAGLCDLAAT RFVVENAPQA IRWLQGLGVP FSQEEGALHL TREGGHSARR
IVHATDATGA AVQRTLIDVV RATPGITLFE HHTLVDLITS AKLGLAGAQR CLGLYALDEA
TDEVLTFRAP HTILATGGAG KVYLYTTNPD TATGDGIAAA WRAGCRVSNL EFIQFHPTCL
YHPHVKSFLI TEAVRGEGGQ LKLPPQAGGT RFMPQHDARA ELAPRDIVAR AIDFEMKKHG
LDCVHLDISH QSPAFLQEHF PTILARCAEL GIDITREPIP VVPAAHYTCG GVLTDLAGRT
DLHGLFAIGE TACTGLHGAN RLASNSLLEC MVFARAAAAH IQQAQRADLP ALPAWDDSRV
TDADECVVIS HNWDELRRFM WDYVGIVRTT KRLERAAHRI ALLQGEIQEF YANFHVTRDL
LELRNLVQVA DLIVKSAQMR HESRGLHFSR DWPDVAAPAA PTILVPPAR
|
|---|
| |