| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2589 |
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| Symbol | |
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| ID | 7384258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2750929 |
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| End bp | 2753586 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643655897 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_002554024 |
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| Protein GI | 222111760 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCGCT GGAAATTTTC TGTCCTGGCC ACCGCGGCCA TCCTCTCGGC TGGTCTTTAC
ACCACCGATG CAAGTGCTCT CGCCCTGGGC CGCGTGAATG TCCAGTCGGC GCTTGGCGAG
CCCCTGCGCG CGGAAGTCGA ACTGCCCCAG ATCACTGCTG CCGAGGCCGA ATCGCTGCGC
GTGAGCACCG CCAGCCCTGA AGTTTTCCGC AGCCAGGGCA TGGAATATTC CCCCGCTGCG
CACAGCGTGC AAGTGCAACT GCACCGCCGC ACGAATGGCT CCATGGTGCT GCGCTTGAGC
AGTACCCGCC CGGTCAACGA TCCCTTCGTG GATTTGGTTA TCGATGCGAC CTGGAGTTCC
GGCCATATCG TGCGTAGCTA CACGATGCTG TTCGACCCGC CGGCGAGCCG CCCGCAGGCG
GCGGTGACCG CCGCACCTCA GGTAACGTCA CCCCGTGCCG CGGCAACTGC GCCGCGCACC
CCCGCCACCA CCGCGGCGCC CGCGCCTGTC GCACGCCCAG CAACCCCTCC CGCACCCGCC
GTTGCTGGCC GTCCCACCCC CGCAGAGGCA CCCGCGTCCG CTGGCGTTGA CGAGATTCGC
GTGCGCCCCG GGGATACGGC CGGCCGCATC GCGGAAGCCC ATCGCCCCGC TGGCGTCTCG
CTGGACCAGA TGCTGGTAGC AATGATGCGC GCCAATCCGG ACGCGTTCGT CAACAGCAAT
GTGAATCGTC TGCGTTCCGG CGCAGTGCTG CAGATGCCTA GCGAAACGGA GGCGCAAGCC
ACGGACGCCA CCGAAGCTCG CAAGATCGTC GCCGCGCAAA GCCGCGATTT CAATGAATTC
CGCCGCCGCA TGGCTGCGAC AGCGCCCAAG GCCGAGGTTG CGGCCGCAGA GCGCTCCGCG
CGCGGCACTG TGCAGACCCA GGTGGACGAG AGCAAGCCCG CCGCTGCCGG CCCCGATAAG
CTCACTCTCT CCAAAGGCAG CGTTCAGGCC CAAAAGACCG AGGAGCAGAT GGCCCGCGAC
AAGCAGGCCG AACAGAACAG CGCCCGCATG GCGGAGCTGT CCAAGAACAT CTCGGACCTG
AACCAGCTCA GCGGCGCCTC CGCGCCAGCC GGCGCTGGCG CAGCTGCGCC AGGAGCCACG
GCGCCTTCCG CCCCTGCCAG CCAGCCGGCG GTGGCAGTAC CCGCCGCCGG GGGGCTGCCC
GCGCCCGCTA CCGCGGCTGC AAGCGCCGAC ATGAGCACTG CTACGGCAGA AGCTGCCGCA
CCAGCGCCCG AGGCCTCTGC CGCCGAGGCG GCTGTTCCCG CCGAAGCAGC ATCTCAGGCC
TCTGCCGCAG CACCCGCTCC CGCCACCGTG GCCCCGCGTC CAGCCCCCCA GCCCGTTCCC
TACGAAGAGC CCAGCTTCCT GGATGCCCTC ACGGAGGACC CGCTGCTGGC AGGAGGCGCG
CTGGCGCTCG TACTTGCGTT GCTGGGCTAT GGCGGCTACC GCGTGGTCCA AAGCCGCCGC
AACCAGGGTG CCCTGGACAG TTCGTTCTCG GAAAGCAGCC TGCAGCCGGA TTCCTTCTTC
GGCGCCAGTG GCGGTCAGCG TGTGGACACG GCCAACAGCG AACTCACGAC CGGCTCCTCG
TCCATGACCT ATTCGCCCAG CCAACTGGAT GCCGGTGGCG ATGTGGATCC GGTGGCGGAA
GCCGACGTCT ACCTCGCCTA CGGCCGTGAC CTGCAGGCGG AGGAAATTCT CAAGGAGGCC
CTGCGCCACC ATCCGGAGCG CGTCTCCATC CCCGCCAAAC TGGCCGAGAT TTATGCCAAG
CGCCAGGACC GCAAGGCGCT GGAGTCCGTC GCCAACGACG TGTTCAGGCT CACCAACGGC
CAGGGGCCCG ACTGGACCCG CGTGTCCGAC CTGGGCCGTA CGCTCGACCC CGAAAATCCG
CTGTACCAGC CCGGTGGCCG TCCTGCCGTT GCCGCCAGCG CCACAGCAGC CGCTGCATCG
ACCGCGGCCT TTGCAAGTAC GCTGGGCGCA GCAACTGCTC CCGCGGCACC CACGGGCGGA
CCGGACTCTG TGCTGCCAGA CCTCGATCTG GACTTGGATC TCGATCTGCA CGAAGCACCG
TCGGCTCCGG CCCCGGCGCC AAGCACGTTT GCCATGGCCG CAGCCAACAA CACCGCCGCA
GCCGCGCCGG TAGTGCCGGC CGCCCAGGCG CCCGTCCCGT CCCTGGATCT GGGCGACCTG
GAACTACCCC AGGCCTCCTG GGACGAGCCA GCGGTGACGC CGCAGGCGAC GACAGAGCCC
GACGTGCAAA GCGAGCCTCT TCCGTTGAAC CTGGACGATG ACTTGTCCCT GATGGACTCC
GGCGTCGCCC CCCTGACCAG CCGCGACGCG AAGGCCGCCA CCTCGGAATC CCTGGAATTC
GACCTCGGCG ATCTGTCGCT GGACCTTGAC ACCCCCACGG CGGCCGTTCC CGTCGCGCCC
TCGGTCGCCG CCAAGGCAGC GTCCTCCGCT GCCGACGCGC TGCCGGACGA CCCTCTGGCC
ACCAAGCTCG CACTGGCGGA AGAGTTCAAC ACCATTGGCG ACAGCGAAGG CGCGCGGGCC
CTGGTGGAAG AGGTCATCGC CGAATCGTCC GGTGAGCTGA AGGCCCGCGC CCAGCGACTG
CTCGCCGAAC TGGGCTGA
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| Protein sequence | MHRWKFSVLA TAAILSAGLY TTDASALALG RVNVQSALGE PLRAEVELPQ ITAAEAESLR
VSTASPEVFR SQGMEYSPAA HSVQVQLHRR TNGSMVLRLS STRPVNDPFV DLVIDATWSS
GHIVRSYTML FDPPASRPQA AVTAAPQVTS PRAAATAPRT PATTAAPAPV ARPATPPAPA
VAGRPTPAEA PASAGVDEIR VRPGDTAGRI AEAHRPAGVS LDQMLVAMMR ANPDAFVNSN
VNRLRSGAVL QMPSETEAQA TDATEARKIV AAQSRDFNEF RRRMAATAPK AEVAAAERSA
RGTVQTQVDE SKPAAAGPDK LTLSKGSVQA QKTEEQMARD KQAEQNSARM AELSKNISDL
NQLSGASAPA GAGAAAPGAT APSAPASQPA VAVPAAGGLP APATAAASAD MSTATAEAAA
PAPEASAAEA AVPAEAASQA SAAAPAPATV APRPAPQPVP YEEPSFLDAL TEDPLLAGGA
LALVLALLGY GGYRVVQSRR NQGALDSSFS ESSLQPDSFF GASGGQRVDT ANSELTTGSS
SMTYSPSQLD AGGDVDPVAE ADVYLAYGRD LQAEEILKEA LRHHPERVSI PAKLAEIYAK
RQDRKALESV ANDVFRLTNG QGPDWTRVSD LGRTLDPENP LYQPGGRPAV AASATAAAAS
TAAFASTLGA ATAPAAPTGG PDSVLPDLDL DLDLDLHEAP SAPAPAPSTF AMAAANNTAA
AAPVVPAAQA PVPSLDLGDL ELPQASWDEP AVTPQATTEP DVQSEPLPLN LDDDLSLMDS
GVAPLTSRDA KAATSESLEF DLGDLSLDLD TPTAAVPVAP SVAAKAASSA ADALPDDPLA
TKLALAEEFN TIGDSEGARA LVEEVIAESS GELKARAQRL LAELG
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