Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2539 |
Symbol | |
ID | 7384810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2701216 |
End bp | 2704833 |
Gene Length | 3618 bp |
Protein Length | 1205 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643655847 |
Product | type 4 fimbrial biogenesis protein PilY1 |
Protein accession | YP_002553974 |
Protein GI | 222111710 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTCC ATGCCCCCTC CCACACCCGT TTCAAGAAAA CCCTGCTCGC GTCGCTGATC GGCGCGGCGC TCGCGCCGCA CACTGCGCTG GCGCTGGACT TTGCCCAGGC GCCGCCGGGC ACGGTGGAGC CGTATGTGGC GCCGAACGTG ATCTTGTCGC TGGACGATTC GGGCAGTATG AATACCGCAG ACATGACACT CCCTGGGGTA CTGCGAGATC CCAGTAGGCC TTACTGCAAC AGAACAGGAG GGTGTAGCGG TGGCAACGCT TACAACCCCT GGGTAACCGC GCCCCAAACC CTTACCCGCA CGAAGGTGCT GGCTGACGCC CTCAAGGACA CGTTCAGTGA CACCGCTCTG CTGCCCAACG GAAAAATCCG CATGGCTTGG CAATCCATGA ATAACAGCAC CACCGGCTCC GGCCTGACGC TCAGCGACCT GGGCACTGCC GCAGCAACGA ATGGAACCAG CCACAACATG ATGCGCGTAC TGGACGCAAC CCATCGCGCC AACTTCATCG CGTATGCCAA TAAGTACAGT GCTAGCGGCA ACACCCCCAC CCATCGCATG GTGCAACGTG CAGACGACTA CATGCGCGCG ACTCCACACC AGAACGGCCC CTGGGCCGAT GTTCCCGGCA CAAAGCTGGC GGACGCGAAA AACGACAACA AACCACTGGG CTGCCGCCGC AATTACCACA TCCTACTGAC TGACGGTGGC TGGAACCAAT ACGTTCAGTC CACCACCCCC CTCAATTACG ACAACCGCAC GAGCCCCGAC CTGCCCAACG GCAAACCCTA TACCGCCACG GCGCAAACCC GCCTCTACCG GGATAGCGAG GACTTCACCA CCATTGCCGA CTGGGCCTTC CAAAGCTGGG CCAATCCGCT GCGCCCCGCC ACTGATCTCC ACGGCAAAGT GTCTCCCCTG CCCGAGTATG ACAATGCGCC TGCCTCTGAA ACCATCACGA ACCGCGTGAC CAAAACAACG GCCACGCTGG AGAAATTCTG GAACCCCAAA TACGACCCGG CCGACTGGGC GCACATGGTT ACTTTCACCA TCGGTTTCAG CACGGACGCG CTTCCCCAGA AAAACTACAG CCTCAACAAA GACGGCACAT CGGTCACGGA TCAAGGCGCG ATCACCGCTC CGACCACCCT GCTGCCCTAT GGCGATGATG GCAATCTGGC CGACTATGCC AATGGCACCT ATACATGGCG CGCTTACGGC GGCAGCTCCA CTGGAACCAC CGTTACCAGT ACCCGCGACA GGGGGCACGA CATGTGGCAT GCAGCCCTCA ACGGCCGGGG ACGCTTCTAC GCCGTGGAAA AGGGTGAAGA TCTGAAAGAG GCATTCAGGC AGATCGTGCG CACCATCAAC GCCGAAACCG AGCCAGACCG TGGCTCCACC GCCACCAGCG GCAGCAACGC ATCACAGAAC GACGTGGGTA TCTTCACTGC CAGCTACGTA CCCAAGGAGG GCTGGCGGGG CGCCGTATCG TCCGAGACTT TCAAGAGCGA CGACGGCACC ACCGTGCAAG CCTGGGACGG CAAGACCACG GCCGACAAGC TGGACGACAC AGCTTTCAAC GTGACCAACC GCCTGGTATT GACCTGGAAT GACGACATCC CCTCCGGAAG TACGGCAGAA GTGGGCGGCA GGCCGTTCAA GTGGACCAGC GGCAATACCA ACCTAAGCGC GGACCAGAAG GTCCTGCTGA CCGCCACCGG CACGAATGGC GGCCCCTCGG GCACTGCTGG CGCCGATGGA AACAACCGTG TGAACTACCT GCGCGGCGTG CGCGATCTGG AGTGCCCCGA CGCTGGCTGC ACGACCGACA AACCTTTCCG CAAGCGCTGG AGCCGCCAGG GCAGCATCAT CAATTCCGAG GTGTGGTACC TGGGCGCACC TACAAGCAAT TACGCCCTGG AGGGCTACAC CGCCTTTACA CGCACCTGGG CCAAGCGCGA GCCCATGCTC TATGTGGGCG GTAATGACGG CATGCTGCAC GGCTTTACCG CCGCGGACGG CACGGAACGC ATCGCCTACG TGCCCCGTGG CGTGATGCGC GACCTGCCCA AGCTCACCAA CCCGACCTTC AACAACAATC ACCAGTACTT CGTCGATGGC TCTCCCATGA CGGGCGATGT GTTCGACAGC GAGTGGAAGA CCCTGCTGAT AGGCACGCTG GGCGCGGGTG GCCGGGGCTA TTTTGTGCTG GACGTGACCA ACCCCGGCAA GACGGACGGC ACAGGCAGCA GCAACTTCAC CGAAACCAAT GCGAACAGCC TGGTGGTGAT GGACAAGACC CTCCCCGCCA GCACCACCAC CGCGAGCAAT GACGACGTGG ACGACCTGGG CCATATCTTC GCCAAGCCGG TGATGGACGA TGCCAACCCG CAACGCACCA CGCAGATCGT GCGCATGAAC GACAACCGCT GGGCCGCGGT GATGGGCAAT GGCTACAACA GCGCCAACGG ACGGCCCGTG CTGCTGATCC AGTATCTGGA CGGCGCCAAG GAGCTGCTGC GCATCCCGGC CCTGACGACG GACACGGACA ACGGCCTGTC GGCCCCCCGC CTGGTGGACA TCAGCGGCGA TGGCCGGCCA GACGTGGTGT ACGCGGGCGA CCTCAAGGGC AACCTGTGGA AGTTCCTCAT CAACACCGAA GATGCCAGCC AATGGGGCGT AGCAACTTGG GAAGGCAAGG CTGCCGGCAC ACCGCTGTTC ACGGCCAATC GCGGCACGGG ACATTCGGCC AACACGAACA GCTCCACGCG GCAGTCCATC ACCGCTGCCC CCTCAGCGCG GGTGAACGAC CGTACCAAGA CCACCGGCAC CGGCACCAGC GCCGTGACCG GTGCCGTGGG CGGCATGATG GTGGCCTTCG GCACCGGCCG CAACGTGACC AAGTTGGACC AGGCAGAACT GCAGCAGCAG ACGCTGTACT CCGTGCTGGA CAACACGCGC TACGAGCGCG AAATGACCGG CACCGCCCCC AACGAGAAGC CGACTGGCCG CGTGAAGGTA TGTGCCACCA CTACCGGCGT CTGCGCCAAG CTGGTGAAAA GCAGCGACGA CCTGCCCCAT GCCGTGGCCC AAAGCGACTT GGTGCAGAGC ACGATTCCCG ACACAGCCGC ACAGACGCGC GACGGCAGGA GTTTCTGGAA GCTGAATGCC TCTACCTTGA ATTGGGCCGA CAAGAAAGGC TGGTTCATGG ACTTTCCCCT GACCCGCGAA CGCCTGCTCA AGCCCATGCA GTTCTACGAC GGCAGCAACC TGTTGATGGT GCCCACGCAA ATTCCCGCCA AGGGATCGCG CCTGGACCCC GCAATCGAAA GCTGCGAAGG CGGTGCAGTT GACAAGGAAA GCCAGTACGT GACGTTCATC AACATCATGG ACGGCCAAGC ACCTCGCGTT CCGATCATTG ACGGACCGAA CGGCCTTGCC CGCTACGGCA TGCCGCCGGG TGCCCTGACA ATGATCGTAA AGGGCAATCG CATCCACATG CGTGGCAGAC AGCCGAAGCA AGGCGGGACG GGCTCGGACC TCGTCGAGGA AAAGATGCGC CGCATGCCGG AAATGTCCTT GCGCCCGAAT TGGCGCCAAC TGAAATAA
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Protein sequence | MTFHAPSHTR FKKTLLASLI GAALAPHTAL ALDFAQAPPG TVEPYVAPNV ILSLDDSGSM NTADMTLPGV LRDPSRPYCN RTGGCSGGNA YNPWVTAPQT LTRTKVLADA LKDTFSDTAL LPNGKIRMAW QSMNNSTTGS GLTLSDLGTA AATNGTSHNM MRVLDATHRA NFIAYANKYS ASGNTPTHRM VQRADDYMRA TPHQNGPWAD VPGTKLADAK NDNKPLGCRR NYHILLTDGG WNQYVQSTTP LNYDNRTSPD LPNGKPYTAT AQTRLYRDSE DFTTIADWAF QSWANPLRPA TDLHGKVSPL PEYDNAPASE TITNRVTKTT ATLEKFWNPK YDPADWAHMV TFTIGFSTDA LPQKNYSLNK DGTSVTDQGA ITAPTTLLPY GDDGNLADYA NGTYTWRAYG GSSTGTTVTS TRDRGHDMWH AALNGRGRFY AVEKGEDLKE AFRQIVRTIN AETEPDRGST ATSGSNASQN DVGIFTASYV PKEGWRGAVS SETFKSDDGT TVQAWDGKTT ADKLDDTAFN VTNRLVLTWN DDIPSGSTAE VGGRPFKWTS GNTNLSADQK VLLTATGTNG GPSGTAGADG NNRVNYLRGV RDLECPDAGC TTDKPFRKRW SRQGSIINSE VWYLGAPTSN YALEGYTAFT RTWAKREPML YVGGNDGMLH GFTAADGTER IAYVPRGVMR DLPKLTNPTF NNNHQYFVDG SPMTGDVFDS EWKTLLIGTL GAGGRGYFVL DVTNPGKTDG TGSSNFTETN ANSLVVMDKT LPASTTTASN DDVDDLGHIF AKPVMDDANP QRTTQIVRMN DNRWAAVMGN GYNSANGRPV LLIQYLDGAK ELLRIPALTT DTDNGLSAPR LVDISGDGRP DVVYAGDLKG NLWKFLINTE DASQWGVATW EGKAAGTPLF TANRGTGHSA NTNSSTRQSI TAAPSARVND RTKTTGTGTS AVTGAVGGMM VAFGTGRNVT KLDQAELQQQ TLYSVLDNTR YEREMTGTAP NEKPTGRVKV CATTTGVCAK LVKSSDDLPH AVAQSDLVQS TIPDTAAQTR DGRSFWKLNA STLNWADKKG WFMDFPLTRE RLLKPMQFYD GSNLLMVPTQ IPAKGSRLDP AIESCEGGAV DKESQYVTFI NIMDGQAPRV PIIDGPNGLA RYGMPPGALT MIVKGNRIHM RGRQPKQGGT GSDLVEEKMR RMPEMSLRPN WRQLK
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