Gene Dtpsy_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2458 
Symbol 
ID7383960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand+ 
Start bp2612548 
End bp2613225 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID643655766 
ProductABC transporter related 
Protein accessionYP_002553894 
Protein GI222111630 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.110917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCCC AACCCACGAC CCTGCTGCAG GTGCGCGGCC TTGCCAAGCG CTACGGCGGG 
CAGGCGGTGT TCGAGGGCGT GGATCTGCAG GTGCAGCGCG GAGAGTTCGT CGCCATCGTT 
GGCGACTCGG GCGTGGGCAA GTCCACGCTG CTCAACTGCC TGGCGGGGCT GGACCATTGG 
GATGCCGGTC AGGTGCTGCA CGAGGGCGTG GATCTGGGGC AGTTGGACGA CACGCAGCGC 
GCCCTGTGGC GCCGCGCCCA TGTGGGCTTC GTGTTCCAGG CCTTCCATGT GCTGCCGCAT 
CTGGACGTGG CACAGAACGT GGGCCTGCCG CTGATGCTGC TCAACCGCTC CGATGCGCGG 
CGCGTGCAGC AGATGCTGGC CGCCGTGGGC CTGGAAGGCC TGGGCGAGCG GCTACCGCAG 
CAGCTCAGCG GGGGGCAGTT GCAGCGCGTG GCCATTGCCC GCGCGCTGGT GCACCGCCCC 
GCCCTGCTGC TGGCCGACGA GCCCACGGGC AATCTGGACC CCACCACGGC GGCGCTGGTC 
ATGGATCTGC TCATCGCCCA GACCCGCGAG CACGGCGCCG CGCTGGTGCT GGTGACCCAT 
TCGCAGGCCG CCGCGGCGCG GGCGGACCGG GTGCTGCGCC TCACGGCGCA GGGTATCCGC 
CCGGCGCAAG CGATTTAG
 
Protein sequence
MSPQPTTLLQ VRGLAKRYGG QAVFEGVDLQ VQRGEFVAIV GDSGVGKSTL LNCLAGLDHW 
DAGQVLHEGV DLGQLDDTQR ALWRRAHVGF VFQAFHVLPH LDVAQNVGLP LMLLNRSDAR 
RVQQMLAAVG LEGLGERLPQ QLSGGQLQRV AIARALVHRP ALLLADEPTG NLDPTTAALV 
MDLLIAQTRE HGAALVLVTH SQAAAARADR VLRLTAQGIR PAQAI