Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2334 |
Symbol | |
ID | 7383194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2487589 |
End bp | 2488755 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643655642 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002553771 |
Protein GI | 222111507 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.10397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGC CGTTCATCGT CCACCCTTGT GCGCCGCGCA GGCGGCTGCT GCAGTCGCTG TGCGCGAGTG CCTGTGCGCT CGCGTGGCCG GCGCTGGCCC AGCAGCGCTC GGCAGACGCC AAGGCAGCCA TCCTCATCGG GCGCTCCTCG GCCCTGTCGG GCCCCATGGC GCCGTTCCTC ACGCCCGTGC ACGAGGGGCA GGAGGCCGCC CTGGCGGACT TCAACGAGGC CGGCGGCGTC GCAGGGCGCA AGGTGCAGCT CGTGTCCCTG GACGACAAGT TCGACGCCGC GCTCGCCCTG GACAACGCCC GCAGACTCGT GCAGGACAGC GGCGTGGTCG CGCTGTTCGG CCAGGCCGGC ACCTCGCAGG TGCTGGCGCT GCTGCCCTAC CTGGCGCAGG CGCGCACCCC GCTGGTGGCC GTCTACACCG GCAGCCCCGC AGTGCACGGC GCGCGCAGCC CCTACCTGTT CACCACCAGC GCCAGCTACG CGGACGAGCT GGTGAAGATC GTGCGCAACC TCGTGGCCAT TCAGACCACG CGCATCGGCG TCGCCTACGA GAACAACGAC TTCGGCAAGC TCGCGCTGCC CCTGGTCGAG AAGGCCATCA CGGCCGAGGG CGGCACCTTC GTGGGCGCCC ATGCCACGCA CAGCAGCGGC CAGGACGCCG AGGCCGCCGC CAAGGCCCTG GCGGCCCTGC GGCCGCAAGC CGTGGTAATG ATTGCCGCGG GCCCGCCCGT GGTGGCCTAC GTGCGCGCCA ACAAGGCGCA CCTGGGCGTG CCGGTGTACA CGCTGTCGCT GGGCGCGGGT GCGCAGGTCA TCCGCGCACT GGGCAGTGAC GCGCGCGGGC TGGCCGTGGC GCGCACCACG CCGCCGCCCA CGCGGCTGAC CACCGCCGTG GCACGCGAGT TCCAGGCGTC CATGAAGCGC CACGGCCACC CCGTGGACTA CGACCGCTTC AGGGGCTACC TGGACGCGCG CATCCTCATT GAAGGCCTGC GCGCCTCGGG CCCTTCGGTG ACGGGCGCGT CGCTGGCCGC GACCCTGGAA GGGCTGCACA AGGTGGACCT GGGCGGCTAC ACCTACCAGT ACAGTGCGCA GAACCGCAAT GGCTCCAGCT ATGTGGACAT TGCCGTGATC GGGCCCGACG GCAACTACAT GCACTGA
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Protein sequence | MTTPFIVHPC APRRRLLQSL CASACALAWP ALAQQRSADA KAAILIGRSS ALSGPMAPFL TPVHEGQEAA LADFNEAGGV AGRKVQLVSL DDKFDAALAL DNARRLVQDS GVVALFGQAG TSQVLALLPY LAQARTPLVA VYTGSPAVHG ARSPYLFTTS ASYADELVKI VRNLVAIQTT RIGVAYENND FGKLALPLVE KAITAEGGTF VGAHATHSSG QDAEAAAKAL AALRPQAVVM IAAGPPVVAY VRANKAHLGV PVYTLSLGAG AQVIRALGSD ARGLAVARTT PPPTRLTTAV AREFQASMKR HGHPVDYDRF RGYLDARILI EGLRASGPSV TGASLAATLE GLHKVDLGGY TYQYSAQNRN GSSYVDIAVI GPDGNYMH
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