Gene Dtpsy_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_2313 
Symbol 
ID7384906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp2458700 
End bp2459470 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content71% 
IMG OID643655622 
ProductABC transporter related 
Protein accessionYP_002553751 
Protein GI222111487 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGC CCGCCGATGC GCAGCCGCTG ATCCGCCTGC GCGGCATCAC CAAGGTGTAC 
GGCGAGGGTG CGCTGGCTTT CCAGGCGCTC AAGGGCGTGG ACCTGGACAT CGACAGCGGC
GACTTCGTGG CCATCATGGG CCCCAGCGGC TCGGGCAAAT CCACGGCCAT GAACGTGCTG
GGCTGCCTGG ACCGGCCCAC CGCGGGTACC TACCTGTTTC GCGGGCTGCC GGTGCACTCG
CTGTCGCGCG ACGACCGTGC GCGCCTGCGG CGGCGCTTCC TGGGCTTCGT GTTCCAGGGC
TTCAACCTGC TGGCGCGTAC CTCGGCGCAG GAGAACGTGG AGCTGCCGCT GCTGTACCGC
GGCGAGAGCA CGGCCGCGCG CCATGCGGCT GCGGCCCGCG CCCTGGACGC CGTGGGCCTC
AAGGGCTGGG AGCACCACAC ACCGGCCGAG CTGTCCGGCG GGCAACAGCA GCGCGTGGCG
ATTGCGCGCG CCATCGTCAC CGAGCCTACG GTGCTGCTGG CCGACGAGCC CACCGGCAAC
CTGGACACGC AGCGCAGCCG CGAGATCATG GAACTGCTGT GGCGCCTGAA CACCGAGCAG
GGCATCACCG TACTCATGGT CACGCACGAG CCCGACATGG CGCAGTACGC GCGGCGCATC
GTGCGCTTCG TGGACGGGCG CATCGAAAGC GACGAGCGCA ATCCGCACCC GCATGCGCAG
GTGCCCCGGG AAGCGCCTGC AAGTGCAGGC ACGGGGGAGG TGGCGCCATG A
 
Protein sequence
MMAPADAQPL IRLRGITKVY GEGALAFQAL KGVDLDIDSG DFVAIMGPSG SGKSTAMNVL 
GCLDRPTAGT YLFRGLPVHS LSRDDRARLR RRFLGFVFQG FNLLARTSAQ ENVELPLLYR
GESTAARHAA AARALDAVGL KGWEHHTPAE LSGGQQQRVA IARAIVTEPT VLLADEPTGN
LDTQRSREIM ELLWRLNTEQ GITVLMVTHE PDMAQYARRI VRFVDGRIES DERNPHPHAQ
VPREAPASAG TGEVAP