| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2008 |
|---|
| Symbol | |
|---|
| ID | 7385000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2145467 |
|---|
| End bp | 2146258 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643655326 |
|---|
| Product | gluconate 5-dehydrogenase |
|---|
| Protein accession | YP_002553464 |
|---|
| Protein GI | 222111200 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.30693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTA CCGCGCAACA ACTCTTCGAC CTCTCGGGCA AGACCGCCCT CGTCACCGGC
GGCTCGCGCG GCCTGGGGCT GCAGATGGCG CACGCGCTGG GCGAGGCGGG CGCGCGCATC
ATGCTCAGCT CGCGCAAGGC CGAAGACCTC GAGCAGGCCG CCGCCGAGTT GCAGGCCGCC
GGCATCGACG CGCGCTGGGT CGCCGCCGAC TGCGCGCGCG AGGAAGACAT CCATCGCCTG
GCCAGCGAGA CGCTGCAGCG CATGGGCGAC GTGGACATCC TGATCAACAA CGCCGGCGCG
AGTTGGGGCG CGCCGGCCGA GGACCACCCC GTGGCCGCAT GGGACAAGGT CATGAACCTG
AACGTGCGCG GCTACTTCCT GCTGTCGCAG GCGATCGGCA AGCACAGCAT GATCCCGCGC
AAGAGCGGCC GCATCATCAA CGTGGCATCC ATCGCGGGGC TGGCGGGCAA CCCGATCGAG
ATGAAGACCA TTGCCTACAA CACCTCCAAG GGTGCGGTGA TCAACTTCAC GCGCGCGCTG
GCCTGCGAGT GGGGCGTGCA CGGCATCGGC GTGAACGCGA TCTGCCCGGG TTTCTTCAAG
ACCAAGATGG CCACCGTGCT CATCGAGACG CTGGGCGAGG AAAAGATGGC CGCGCACGCG
CCGCTGCGCC GCCTGGGCGA TGACGAAGAC CTCAAGGGCA TCACGCTGCT GTACGCCAGC
GAGGCGGGCA AGCACATCAC CGGCCAGTGG CTGGCCGTGG ACGGGGGCGT GAGCGCGGTC
ATCGGCGGCT GA
|
|---|
| Protein sequence | MARTAQQLFD LSGKTALVTG GSRGLGLQMA HALGEAGARI MLSSRKAEDL EQAAAELQAA
GIDARWVAAD CAREEDIHRL ASETLQRMGD VDILINNAGA SWGAPAEDHP VAAWDKVMNL
NVRGYFLLSQ AIGKHSMIPR KSGRIINVAS IAGLAGNPIE MKTIAYNTSK GAVINFTRAL
ACEWGVHGIG VNAICPGFFK TKMATVLIET LGEEKMAAHA PLRRLGDDED LKGITLLYAS
EAGKHITGQW LAVDGGVSAV IGG
|
|---|
| |