Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2000 |
Symbol | |
ID | 7382119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2137886 |
End bp | 2139292 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643655318 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002553456 |
Protein GI | 222111192 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0919237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGGCT TACCCGTGGG TGCGCCGCCC CTGGCCGACG GCCTGCCGCA GCCCGCACGC CGCCAGGCGA TGCTGGTCAT CGTTCTCGGG CTCACGCTGG CGGTGCTCGA CAGCAGCATC GTCAACCTGG CGCTGCCCGA CATCGCACGC CAGTTGCAGT CGGGCGCGGC GCAGAGCGTG TGGGTGGTCA ACGCCTACCA GCTCGCCACG CTGGTCGTGC TGCTGCCGCT GGCCGCGCTG GGTGAGCGCG TGGGCTACCG GCGCGTGTAC TTGGTGGGCA TGGCGCTGTT CGCGCTGGCG TCGGTGGGCG CCATGCTGGC GGCCAGCATG CCCGCCTTGA TTGCCGCGCG GGCGTTGCAG GGCCTGGGCG CCGCGGGCGT GATGGCCGTG AATGCGGCGC TGGTGCGCCT GATCTATCCG CGCGCACAGC TGGGCCACGG CATGGCCATC AATTCGCTGG TGGTGGCCAC CGCGTCCATG GCGGGGCCGT CGGTGGCGGC GGCCATCCTG TCGGTGGCGT CGTGGCCCTG GCTGTTTGCC ATGAACCTGC CCTTGGGCGT GGGAGTCTGG TGGCTGGGGT GGCGCGCGCT GCCGGTCAAT CCTCCATCCG CCAACCATGC GCCGCGCTTT TCCGCCATCG ACGTGCTACT CAACGGCGCC ATGTTCACGC TGCTGTTCCT GGGCGGGGAG CAACTGGGCG TGCGCAGCGC GGCGCAGGGC GGCAGCGCGG CTACGGGTGC GATCCTGCTG GCCGCGGGTG TGGCCGTGGG GGCGGTGTTC CTGTGGCGCC AGCGCGGCTT GGCGGCGCCG CTGTTTCCGG TGGACCTGCT GCGCATTCCG GTGTTCGCCC TGTCGATGGG CTCGTCCGTG GGGGCGTTCT GCGCGCAGAT GCTGGGCTTT CTGTCGCTGC CCTTCCTGCT GTTGGAGGCG CAGGGCCGCA CCCACTTGGA GGCCGGACTG CTCATTACGG CCTGGCCCCT GGCCACCGCC GTGGTGGCGC CGCTGGCGGG CCGATTGATT GGCCGCTACC CGGACGGCCT GCTCGGCGGC ATTGGCATGG CGGTGTTTGC TGCCGGCCTG GTCTCGCTGG GCCTGATGCC CGCGCAGCCC GCGGACTGGA ACGTGGCCTG GCGCATGGCG CTGTGCGGTG CGGGCTTTGC GCTGTTTCAG TCGCCCAACA ATCACACCAT CGTCACCTCG GCCCCGCTGC ACCGCAGCGG CGCGGCCAGC GGCATGCTGG GCACCGCGCG CCTGACGGGC CAGACACTGG GCGCCGTGTC GCTCGCGGCC ATCTTCGCCC TGCGGCCGGG GCACGATGGA AGCGCGGAGT CGCTGGCACT GCTGGTGGCA GGGGCGTGCG CGGTGGTGGC AGGGGTGTGC AGCTCGCTGC GGGTGAGGCA GCGGTAA
|
Protein sequence | MSGLPVGAPP LADGLPQPAR RQAMLVIVLG LTLAVLDSSI VNLALPDIAR QLQSGAAQSV WVVNAYQLAT LVVLLPLAAL GERVGYRRVY LVGMALFALA SVGAMLAASM PALIAARALQ GLGAAGVMAV NAALVRLIYP RAQLGHGMAI NSLVVATASM AGPSVAAAIL SVASWPWLFA MNLPLGVGVW WLGWRALPVN PPSANHAPRF SAIDVLLNGA MFTLLFLGGE QLGVRSAAQG GSAATGAILL AAGVAVGAVF LWRQRGLAAP LFPVDLLRIP VFALSMGSSV GAFCAQMLGF LSLPFLLLEA QGRTHLEAGL LITAWPLATA VVAPLAGRLI GRYPDGLLGG IGMAVFAAGL VSLGLMPAQP ADWNVAWRMA LCGAGFALFQ SPNNHTIVTS APLHRSGAAS GMLGTARLTG QTLGAVSLAA IFALRPGHDG SAESLALLVA GACAVVAGVC SSLRVRQR
|
| |