| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1962 |
|---|
| Symbol | |
|---|
| ID | 7382080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2098309 |
|---|
| End bp | 2099679 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643655279 |
|---|
| Product | protein of unknown function DUF482 |
|---|
| Protein accession | YP_002553418 |
|---|
| Protein GI | 222111154 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.846465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTTA AGTGGTTGAT TCGTAACGCC CGCCCCTGCA CCGCCTCATT TTTAAGCAGG
CTGCGCTACC GCGGAGAAAT CCCCACGGCC ACGCGGTCCG GGCTTTGGGG ACATGATGCG
CCCTGCCCTG ATTGCGGCAC CGCCCACTGC ATGACCACAC CCTGCCCTGC CAGCACGCCT
GCTTACGCAT TGCACCTGCA CGACTCGATC CATCGCGTGG GCGCCGATGC ATGGGACGCA
CTGCTGGCGC TCCAGCCCCA CCCCACGCCC TTCCTGCGCC ATGCCTACCT GTGCGCGCTC
GAAGACAGCG GCAGCGCCAC GCCCGCCCGG GGCTGGACGC CCGTCGTGTT CACCCTGTGG
GCGGGCACGG ACCTGCAGGC AGCCTGCATC GTGTACGCCA AGGCGCACTC GTACGGTGAG
TACGTGTTCG ATTGGGCCTG GGCCGATGCC TACGCCCGCC ACGGGCTGGC GTACTACCCC
AAGGCCGTGG CCGCCGTGCC GTTCACGCCG GTGCCCGGCA CCCGGCTGAT GGCCTGCGAC
GATGCCGCGC GGGACGCCCT GCTGCGCGCC GTGCTGGACT GGGCGAAGCA GGCGGAGCTG
TCGTCCCTGC ACCTGCTGTT CGGCGCGCAG CAGGATCTGG CTGCAGCGCA CCAGGCGGGG
ATGCTGCTGC GCAGCACCGT GCAGTTCCAC TGGCACAACC GGCGGCCCAT GGACGGTGCA
AGGTTCGCGG ATTTCGAGGA CTTCCTCGCC TCCCTGAACC AGGACAAGCG CAAGAAGATC
CGCCAGGAGC GCCGGCGCGT GGCCCAGGCG GGGGTGTGCT TTCGCGTGCT GCGGGGCACG
CAGATCACCA CAGCAGACTG GGACTTCTTC TACCGCTGCT ACGAGCGCAC CTACCTGGAG
CACGGCAATC CGCCCTACCT GACGCGGGCC TTCTTCCACG CCATGCAGCA GCACATGCCC
GAGGCCTGGG TGCTTTTCGT GGCGGAGCGC GCGGGCCGCC CCATTGCTAC CAGTTTGATA
GCTGTTGGCG CTTATCCCAA CTGCGTAAAC ACCCCAAATG ACATGCAATC CGTGGCCTAT
GGCCGCTACT GGGGTGCGCT AGAACGGGTG GACTGCCTGC ATTTCGAGGC CTGCTACTAC
CAGCCCATCG AGTGGTGCAT CGCGCAGGGT GTGCACCGTT TCGAAGGCGG TGCGCAGGGC
GAACACAAGA TGGCCCGCGC CCTCCTGCCC GTGCGCGCGC AGAGCGCCCA CTGGCTGGCG
CACCCGGCGT TTGCCGAAGC CGTGGACCGG TTCCTGGCGC GTGAAGGCGA AGGCGTGGAG
CACTACCTGG AGGATCTGCA CGCGCGCAAC CCCTTCCGTC GGGCAGGCTG A
|
|---|
| Protein sequence | MRLKWLIRNA RPCTASFLSR LRYRGEIPTA TRSGLWGHDA PCPDCGTAHC MTTPCPASTP
AYALHLHDSI HRVGADAWDA LLALQPHPTP FLRHAYLCAL EDSGSATPAR GWTPVVFTLW
AGTDLQAACI VYAKAHSYGE YVFDWAWADA YARHGLAYYP KAVAAVPFTP VPGTRLMACD
DAARDALLRA VLDWAKQAEL SSLHLLFGAQ QDLAAAHQAG MLLRSTVQFH WHNRRPMDGA
RFADFEDFLA SLNQDKRKKI RQERRRVAQA GVCFRVLRGT QITTADWDFF YRCYERTYLE
HGNPPYLTRA FFHAMQQHMP EAWVLFVAER AGRPIATSLI AVGAYPNCVN TPNDMQSVAY
GRYWGALERV DCLHFEACYY QPIEWCIAQG VHRFEGGAQG EHKMARALLP VRAQSAHWLA
HPAFAEAVDR FLAREGEGVE HYLEDLHARN PFRRAG
|
|---|
| |