| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1777 |
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| Symbol | |
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| ID | 7382543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1891856 |
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| End bp | 1892770 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643655093 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002553234 |
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| Protein GI | 222110970 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACAACA GCCACGATCC CCGGGTCCTG CCCATGCGCG ACGGCGTCAA CCCCAGTTGC
GTGGTTCTGC CCTCGGCGGG GCAGGGGCTT CTGGTGGACT TCCTCGCACA GCGCCTGCCC
GCCGTGTCGC GCGAGGACTG GCTGCGCCGC CTGCGCGCGA GCGAAGTGGT GGACGAGTTC
GGCGCGGCCG CCACGGAGCG CAGCGCGTTC ACGCCGGGCG TACGCTACTA CTACTATCGC
GAACTGCCGC CCGAGCCCGA GTTGCCGTTC CACGAAACCG TGCTCTACCA GGATGCGCAT
ATCCTCGTGG CAGACAAGCC CCACTTCCTG CCCGTGGTGC CCGCGGGCCG CTATCTGCAG
CAGACCCTGC TGGTGCGCTT GAAGCGCCGG CTGGGCCTGA GCGAGTTGTC CCCTGTGCAC
CGCATCGACC GCGACACGGC AGGCCTGGTG CTGTTTTCCG TGCAGCGGGC AACGCGCGGC
ACCTACCAGG CCCTCTTTCG CGACAGACGG GTGCACAAGG TCTATGAGGC CGTTGCACCG
TGGCGTGCCG ACCTGCCGCT GCCGTGCATC CATGAAAGCC GGCTGGAGGA AAGCGGCCAT
TTTTTCCGCA TGCACGAGGT GCCCGGCACG CCCAACGCGC GCACGCACAT CGACGTGTTG
GAGGTTGCGT CACCCTGGGC GCGCTACCGG CTGGAGCCCA TCACCGGAAA GCGCCACCAG
TTGCGCGTGC ACATGGCCGC GCTGGGCCTG CCGCTGCGCG GCGATGCGTT CTACCCGGAG
GTGAACGACC CGCCGGAAGG GGACTATTCC AACCCGCTGC AACTGTTGGC GCGCACGCTT
GCCTTTACCG ATCCCCTCAG CGGAGAGGCG CGGCTGTTTG ACAGCCGGCT GAAACTGCGC
CCGCTGACGG ATTAG
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| Protein sequence | MHNSHDPRVL PMRDGVNPSC VVLPSAGQGL LVDFLAQRLP AVSREDWLRR LRASEVVDEF
GAAATERSAF TPGVRYYYYR ELPPEPELPF HETVLYQDAH ILVADKPHFL PVVPAGRYLQ
QTLLVRLKRR LGLSELSPVH RIDRDTAGLV LFSVQRATRG TYQALFRDRR VHKVYEAVAP
WRADLPLPCI HESRLEESGH FFRMHEVPGT PNARTHIDVL EVASPWARYR LEPITGKRHQ
LRVHMAALGL PLRGDAFYPE VNDPPEGDYS NPLQLLARTL AFTDPLSGEA RLFDSRLKLR
PLTD
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