| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1494 |
|---|
| Symbol | |
|---|
| ID | 7385136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1568378 |
|---|
| End bp | 1570075 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643654810 |
|---|
| Product | putative inner membrane transmembrane protein |
|---|
| Protein accession | YP_002552955 |
|---|
| Protein GI | 222110691 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATACACC CGACCCCCGC CATCGTTGCC CAGAGCGCCG TGCGCCCGCT GCCGCGTTGG
GCCTTGCTGC TGCTGTGCCT GGCCTATGCC GTTCCCGGCT TCGTGGGGCG CGACCCGTGG
CGCAATGCGG ACATCGCCTC GTTCGGCTAC ATGCGCGAAC TGGCCCTCGG GCGCACCTCC
TGGATGGACC CGCTGCTGGT GGGCGTGCCG CCGGATGGCG ACGGACTGCT GCCCTACTGG
CTGGGCGCGT GGGCCATCCA GGCGCTGGAC GGCTGGCTGC CGGCGGAGCT TGCCGCGCGC
CTGCCGTTCG TCGCTCTGCT GCTGCTGACC CTGGCGGCCA CCTGGTACAG CGTGTACTAC
CTGGCGCGCA GCCCCGGCGC ACAGCCCGTG GCCTTTGCCT TCGGCGGCGA GGCGCAGCCC
GCCGACTATG CCCGCGCCAT GGCCGACGCC GGCCTGCTGG CCTTCATCGC CTGCCTGGGA
CTGGCCCAGC TGTCGCATGA AACCACGAGC TACCTCACCC AGCTGTGCTG CACCGCGCTG
CTGTTTTACG CTGGCTCCGC AATGCCTTGG CGCACGGCGT GGCCCACCTT CACCGCCATT
GCCGGTCTGC TGGGGCTGGT GCTCAGCGGC GCCCCCACGC TCGCAGTGCT GCTGGGCCTG
GGCTGTGCCT GGCTGGTGGC CTGCACGCGC GGCGCGACAC TGCGCAGCCG CGCAGTGGCA
GCGGGCGTGC TGCTGGCCGC CACAGTGGCC GCTGCCGCGC TGGCGCTGCA GTTGGACCTA
TGGCGCTGGC GCATCGTGCG CTTCGAAGAT CTGAAACAGT GGCAAAGCCT GGTGCGCCTG
TTCATCTGGT TCAGCTGGCC CGCCTGGCCC CTCACGCTGT GGACGCTGTG GTGCTGGCGG
CAGCAGATCC TCAGCCGCGA ATGGCACCGG CACCTGTTAC TGCCGCTGTG GTTTGCCCTC
GTGGCCGTGA CAGCCACACT GACCACCCAG CCGGCCGACC GCGCACTGCT GCTGGGCCTG
CCCGCCCTGG CGGCGCTGGC CGCCTTTGCG CTGCCGACGC TGCGGCGCAG CATCGCAGCG
CTGATCGACT GGTTCACCCT GCTGTTCTTC AGCGCCTCGG CCATCGGTAT CTGGGTGGTG
TGGCTGGCGG TGCAGACGGG GGTGCCGGCC AAGCCCGCGG CCAACGTGGC CAAGCTGGCG
CCCGGCTACG TGCCGTCGTT CTCGCTGTTG GCCTTCGGCG TGGCGCTGGC CGCCACGGCT
GCGTGGTGCC TGCTGGTGGT CTGGCGCGCG GCACGCAACC GCCCCGCCAT CTGGCGCAGC
CTGGTGTTGC CCGCGGGTGG CGCCACGCTG GGCTGGCTGC TCATGATGAC CTTGTGGCTG
CCGCTGCTGA ACTATGGCCG CAGCTTCGCA CCCCAGGTGG CGGGTGTTGC CGCAGCCATC
ACCGACCGCG ACAGCTGCGT GGTCGGCTAC GGGCTGAACC GTGCGCAGTT GGCCGCGCTG
CTGCACCATG GGCAACTGCA CATGGTGCCC ACCGAACAGC TGGCGCAGTG TGACTGGGTC
ATCGCAGACG CCTCCGCCGC ACCGCTGGTG AGCGCGTTGC TGCCCCCGGC GCAGTGGCAG
GAGATGGCGA GCGTCAGCCG CCCCACGGAC CGCGGCGACC GCATGCTGGT GCTGCGCCGC
ACGGCCCGCA AGCGCTGA
|
|---|
| Protein sequence | MIHPTPAIVA QSAVRPLPRW ALLLLCLAYA VPGFVGRDPW RNADIASFGY MRELALGRTS
WMDPLLVGVP PDGDGLLPYW LGAWAIQALD GWLPAELAAR LPFVALLLLT LAATWYSVYY
LARSPGAQPV AFAFGGEAQP ADYARAMADA GLLAFIACLG LAQLSHETTS YLTQLCCTAL
LFYAGSAMPW RTAWPTFTAI AGLLGLVLSG APTLAVLLGL GCAWLVACTR GATLRSRAVA
AGVLLAATVA AAALALQLDL WRWRIVRFED LKQWQSLVRL FIWFSWPAWP LTLWTLWCWR
QQILSREWHR HLLLPLWFAL VAVTATLTTQ PADRALLLGL PALAALAAFA LPTLRRSIAA
LIDWFTLLFF SASAIGIWVV WLAVQTGVPA KPAANVAKLA PGYVPSFSLL AFGVALAATA
AWCLLVVWRA ARNRPAIWRS LVLPAGGATL GWLLMMTLWL PLLNYGRSFA PQVAGVAAAI
TDRDSCVVGY GLNRAQLAAL LHHGQLHMVP TEQLAQCDWV IADASAAPLV SALLPPAQWQ
EMASVSRPTD RGDRMLVLRR TARKR
|
|---|
| |